RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
CSF1R-208ENST00000515239 VN1R2Q8NFZ6 395 aa13.8□□□□□ -0.2
CSF1R-208ENST00000515239 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
CSF1R-208ENST00000515239 S1PR5Q9H228 398 aa13.8□□□□□ -0.2
CSF1R-208ENST00000515239 ABCB11O95342 1321 aa13.8□□□□□ -0.2
CSF1R-208ENST00000515239 MED19A0JLT2 244 aaPredicted RBP13.79□□□□□ -0.2
CSF1R-208ENST00000515239 PER2O15055 1255 aa13.79□□□□□ -0.2
CSF1R-208ENST00000515239 LGALS2P05162 132 aa13.79□□□□□ -0.2
CSF1R-208ENST00000515239 TGFB3P10600 412 aa13.79□□□□□ -0.2
CSF1R-208ENST00000515239 GHRP10912 638 aa13.79□□□□□ -0.2
CSF1R-208ENST00000515239 UBA1P22314 1058 aaKnown RBP13.79□□□□□ -0.2
CSF1R-208ENST00000515239 CDC37Q16543 378 aaPredicted RBP13.79□□□□□ -0.2
CSF1R-208ENST00000515239 GPATCH4Q5T3I0 446 aaKnown RBP13.79□□□□□ -0.2
CSF1R-208ENST00000515239 RTN4RL1Q86UN2 441 aaPredicted RBP13.79□□□□□ -0.2
CSF1R-208ENST00000515239 TLE6Q9H808 572 aa13.79□□□□□ -0.2
CSF1R-208ENST00000515239 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
CSF1R-208ENST00000515239 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 KRT37O76014 449 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 GNAT1P11488 350 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 MYCLP12524 364 aaPredicted RBP13.78□□□□□ -0.2
CSF1R-208ENST00000515239 LPIN1Q14693 890 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 VSIG10LQ86VR7 867 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 ADGRF4Q8IZF3 695 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 KREMEN2Q8NCW0 462 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
CSF1R-208ENST00000515239 PDCD2LQ9BRP1 358 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 USP26Q9BXU7 913 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 MLXIPQ9HAP2 919 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
CSF1R-208ENST00000515239 MRPL11Q9Y3B7 192 aaKnown RBP13.78□□□□□ -0.2
CSF1R-208ENST00000515239 EP300Q09472 2414 aaPredicted RBP13.78□□□□□ -0.2
CSF1R-208ENST00000515239 OPLAHO14841 1288 aa13.77□□□□□ -0.21
CSF1R-208ENST00000515239 HSD17B4P51659 736 aa13.77□□□□□ -0.21
CSF1R-208ENST00000515239 ALX1Q15699 326 aa13.77□□□□□ -0.21
CSF1R-208ENST00000515239 RRP12Q5JTH9 1297 aaKnown RBP13.77□□□□□ -0.21
CSF1R-208ENST00000515239 TMEM184AQ6ZMB5 413 aa13.77□□□□□ -0.21
CSF1R-208ENST00000515239 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.21
CSF1R-208ENST00000515239 ZBTB33Q86T24 672 aa13.77□□□□□ -0.21
CSF1R-208ENST00000515239 CMTR2Q8IYT2 770 aaKnown RBP13.77□□□□□ -0.21
CSF1R-208ENST00000515239 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
CSF1R-208ENST00000515239 ANP32EQ9BTT0 268 aa13.77□□□□□ -0.21
CSF1R-208ENST00000515239 PPFIA3O75145 1194 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 BRD1O95696 1058 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 CFBP00751 764 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 MS4A1P11836 297 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 GHRHRQ02643 423 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 MGAT3Q09327 533 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 KCNC3Q14003 757 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 PGM5Q15124 567 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 QRICH1Q2TAL8 776 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 FBXO47Q5MNV8 452 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 MCTP2Q6DN12 878 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
CSF1R-208ENST00000515239 UBALD2Q8IYN6 164 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 LMBR1Q8WVP7 490 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 LINC01599Q8WXQ3 324 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 RMDN1Q96DB5 314 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 GPATCH3Q96I76 525 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 NEK1Q96PY6 1258 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
CSF1R-208ENST00000515239 DNAH14Q0VDD8 3507 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 EPG5Q9HCE0 2579 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 FGAP02671 866 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 SP100P23497 879 aaPredicted RBP13.75□□□□□ -0.21
CSF1R-208ENST00000515239 ERVFC1P60507 584 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 ARHGAP4P98171 946 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 DUSP6Q16828 381 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 SYCE2Q6PIF2 218 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 RUFY4Q6ZNE9 571 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 SMOC2Q9H3U7 446 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 SORCS3Q9UPU3 1222 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 ZNF292O60281 2723 aa13.75□□□□□ -0.21
CSF1R-208ENST00000515239 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 NRCAMQ92823 1304 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 GATMP50440 423 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 CLCN5P51795 746 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
CSF1R-208ENST00000515239 ANKRD54Q6NXT1 300 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 PI4K2BQ8TCG2 481 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
CSF1R-208ENST00000515239 GPR20Q99678 358 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 DCTPP1Q9H773 170 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 AGO3Q9H9G7 860 aaKnown RBP13.74□□□□□ -0.21
CSF1R-208ENST00000515239 VAT1LQ9HCJ6 419 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 MAP3K20Q9NYL2 800 aaKnown RBP13.74□□□□□ -0.21
CSF1R-208ENST00000515239 TELO2Q9Y4R8 837 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 PLXNA4Q9HCM2 1894 aa13.74□□□□□ -0.21
CSF1R-208ENST00000515239 NCOR2Q9Y618 2525 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 NOP56O00567 594 aaKnown RBP13.73□□□□□ -0.21
CSF1R-208ENST00000515239 ARP10275 920 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 HOXA13P31271 388 aaPredicted RBP13.73□□□□□ -0.21
CSF1R-208ENST00000515239 UBE3AQ05086 875 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 MTMR3Q13615 1198 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 DGLUCYQ7Z3D6 616 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 NPAS4Q8IUM7 802 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms