RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 MRPL47Q9HD33 250 aaKnown RBP17.34■□□□□ 0.37
TRIM41-207ENST00000515223 MAPK4P31152 587 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 RAPH1Q70E73 1250 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 DNAAF3Q8N9W5 541 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 FKBP3Q00688 224 aaKnown RBP17.34■□□□□ 0.37
TRIM41-207ENST00000515223 ALCAMQ13740 583 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 MCUQ8NE86 351 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 ZNF653Q96CK0 615 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 TUBGCP2Q9BSJ2 902 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 EFCC1Q9HA90 598 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 KLHL14Q9P2G3 628 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 INHBAP08476 426 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 ACTN1P12814 892 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 GDAP1Q8TB36 358 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 DPH5Q9H2P9 285 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 PARVGQ9HBI0 331 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 SGK1O00141 431 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 KIF3CO14782 793 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 PPP6R2O75170 966 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 SARM1Q6SZW1 724 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 MIPOL1Q8TD10 442 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 PIGBQ92521 554 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 DONSONQ9NYP3 566 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 TET3O43151 1660 aa17.34■□□□□ 0.37
TRIM41-207ENST00000515223 MED14O60244 1454 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 K7ERI5 159 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 DBN1Q16643 649 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 SLFN12LQ6IEE8 588 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 DNAJC24Q6P3W2 148 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.37
TRIM41-207ENST00000515223 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.37
TRIM41-207ENST00000515223 NLRP4Q96MN2 994 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 POLIQ9UNA4 740 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 PPME1Q9Y570 386 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 UNC13BO14795 1591 aa17.33■□□□□ 0.37
TRIM41-207ENST00000515223 GOLGA8QA0A0J9YX86 632 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 GOLGA8OA6NCC3 632 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 GOLGA8NF8WBI6 632 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 SRGAP2CP0DJJ0 459 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 TBC1D10BQ4KMP7 808 aaPredicted RBP17.33■□□□□ 0.36
TRIM41-207ENST00000515223 ADAT2Q7Z6V5 191 aaKnown RBP17.33■□□□□ 0.36
TRIM41-207ENST00000515223 FAM167AQ96KS9 214 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 EPN1Q9Y6I3 576 aaPredicted RBP17.33■□□□□ 0.36
TRIM41-207ENST00000515223 LAMC1P11047 1609 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 DDIT3P35638 169 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 OSTNP61366 133 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 ASPHQ12797 758 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 ARHGAP42A6NI28 874 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 HOXA7P31268 230 aaPredicted RBP17.33■□□□□ 0.36
TRIM41-207ENST00000515223 COPB1P53618 953 aaKnown RBP17.33■□□□□ 0.36
TRIM41-207ENST00000515223 ARL13BQ3SXY8 428 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 OR6B2Q6IFH4 312 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 ELMOD1Q8N336 334 aa17.33■□□□□ 0.36
TRIM41-207ENST00000515223 MCF2LO15068 1137 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 MYL1P05976 194 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 KCTD16Q68DU8 428 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 TOGARAM2Q6ZUX3 1019 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 LCORLQ8N3X6 602 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 SMYD2Q9NRG4 433 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 SLC4A1P02730 911 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 SEPT2Q15019 361 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 THEM5Q8N1Q8 247 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 SDCCAG3Q96C92 435 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 PCIF1Q9H4Z3 704 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 MED4Q9NPJ6 270 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 ATP8B1O43520 1251 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 CLNS1AP54105 237 aaKnown RBP17.32■□□□□ 0.36
TRIM41-207ENST00000515223 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 EEF1GP26641 437 aaKnown RBP17.32■□□□□ 0.36
TRIM41-207ENST00000515223 PPARGP37231 505 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-207ENST00000515223 KPNA2P52292 529 aaKnown RBP17.32■□□□□ 0.36
TRIM41-207ENST00000515223 RECQLP46063 649 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-207ENST00000515223 RNF219Q5W0B1 726 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-207ENST00000515223 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
TRIM41-207ENST00000515223 TOPORSQ9NS56 1045 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-207ENST00000515223 BUB1BO60566 1050 aaPredicted RBP17.31■□□□□ 0.36
TRIM41-207ENST00000515223 MARK3P27448 753 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 CDK8P49336 464 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 MXI1P50539 228 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 MECOMQ03112 1051 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 THOC5Q13769 683 aaKnown RBP17.31■□□□□ 0.36
TRIM41-207ENST00000515223 KRT33BQ14525 404 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 STXBP2Q15833 593 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 MMEL1Q495T6 779 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 DCLK2Q8N568 766 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRIM41-207ENST00000515223 P2RX5Q93086 422 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 PPP1R16BQ96T49 567 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRIM41-207ENST00000515223 DHX40Q8IX18 779 aaKnown RBP17.31■□□□□ 0.36
TRIM41-207ENST00000515223 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 RNF181Q9P0P0 153 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms