RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PPTC7Q8NI37 304 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 HMX1Q9NP08 348 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 TCEAL9Q9UHQ7 104 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 IGKV6D-21A0A0A0MT36 114 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 A6NJR5 290 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 WDR64B1ANS9 1081 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 MARCKSP29966 332 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 CCND3P30281 292 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 TECP42680 631 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 ME1P48163 572 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 GJA9P57773 515 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 EPHA7Q15375 998 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 CYFIP1Q7L576 1253 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 CCSER1Q9C0I3 900 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 UNC45AQ9H3U1 944 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 MLXIPQ9HAP2 919 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 PAK6Q9NQU5 681 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 LRWD1Q9UFC0 647 aa13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 DDX20Q9UHI6 824 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-220ENST00000514830 KIAA0100Q14667 2235 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 EMSYQ7Z589 1322 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 PPFIA4O75335 1185 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 LGR5O75473 907 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 CMA1P23946 247 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 CST5P28325 142 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 ACTR2P61160 394 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 HYIQ5T013 277 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 TMEM63BQ5T3F8 832 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 RESP18Q5W5W9 173 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 ABHD15Q6UXT9 468 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 TLK2Q86UE8 772 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 GJA10Q969M2 543 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 GPR20Q99678 358 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 POLR3CQ9BUI4 534 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 CSRNP2Q9H175 543 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 BCAS3Q9H6U6 928 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 TUFT1Q9NNX1 390 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 DISC1Q9NRI5 854 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
PDLIM5-220ENST00000514830 ARID2Q68CP9 1835 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 SCN10AQ9Y5Y9 1956 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 POTEMA6NI47 508 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 GOLGA6L22H0YM25 854 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 EML1O00423 815 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 CTAGE5O15320 804 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 ADAMTS4O75173 837 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 LYPLA2O95372 231 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 PSAPP07602 524 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 RARBP10826 455 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 RPA1P27694 616 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 CPT1AP50416 773 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 GRIN1Q05586 938 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 HSDL1Q3SXM5 330 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 HABP4Q5JVS0 413 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 HAUS3Q68CZ6 603 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 LHX8Q68G74 356 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 MIS18BP1Q6P0N0 1132 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 OR6J1Q8NGC5 347 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 COPS5Q92905 334 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 ZNF333Q96JL9 665 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 SPATA33Q96N06 139 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 CLIC6Q96NY7 704 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
PDLIM5-220ENST00000514830 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 KDM3AQ9Y4C1 1321 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 NOP56O00567 594 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 KPNA6O60684 536 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 DKC1O60832 514 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 P4HBP07237 508 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 SLC26A2P50443 739 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 UBE2HP62256 183 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 BRDTQ58F21 947 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 GJC2Q5T442 439 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 KRT79Q5XKE5 535 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 NCAPH2Q6IBW4 605 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 SHC4Q6S5L8 630 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 PLPPR4Q7Z2D5 763 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 KLHDC9Q8NEP7 349 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 PYM1Q9BRP8 204 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 SPC25Q9HBM1 224 aa13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 MAFBQ9Y5Q3 323 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-220ENST00000514830 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms