RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 EEPD1Q7L9B9 569 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 BRAPQ7Z569 592 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 TLK2Q86UE8 772 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 PPTC7Q8NI37 304 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 RIT2Q99578 217 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 ZSCAN16Q9H4T2 348 aaPredicted RBP8.05□□□□□ -1.12
SMAD1-213ENST00000514778 AGO4Q9HCK5 861 aaKnown RBP8.05□□□□□ -1.12
SMAD1-213ENST00000514778 PDGFCQ9NRA1 345 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 KCNH7Q9NS40 1196 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 GJB4Q9NTQ9 266 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 SYNRGQ9UMZ2 1314 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-213ENST00000514778 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 KBTBD13C9JR72 458 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 FAM86B1E9PN63 330 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 ADAMTS3O15072 1205 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 HOXD8P13378 290 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-213ENST00000514778 KCNA2P16389 499 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 SYT1P21579 422 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 UBA1P22314 1058 aaKnown RBP8.04□□□□□ -1.12
SMAD1-213ENST00000514778 ARHGAP1Q07960 439 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 NR5A1Q13285 461 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 FSCN1Q16658 493 aaKnown RBP8.04□□□□□ -1.12
SMAD1-213ENST00000514778 INF2Q27J81 1249 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 RILPL1Q5EBL4 403 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 C1orf53Q5VUE5 145 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 CCSAPQ6IQ19 270 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-213ENST00000514778 PIK3AP1Q6ZUJ8 805 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 DHX37Q8IY37 1157 aaKnown RBP8.04□□□□□ -1.12
SMAD1-213ENST00000514778 SLFN12Q8IYM2 578 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 RASGRP4Q8TDF6 673 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 FAM20AQ96MK3 541 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 SDF4Q9BRK5 362 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 CDHR5Q9HBB8 845 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 RTEL1Q9NZ71 1219 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 NOL7Q9UMY1 257 aaKnown RBP8.04□□□□□ -1.12
SMAD1-213ENST00000514778 PHF24Q9UPV7 400 aa8.04□□□□□ -1.12
SMAD1-213ENST00000514778 ELP1O95163 1332 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 SMCHD1A6NHR9 2005 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 DOCK3Q8IZD9 2030 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 BAZ2BQ9UIF8 2168 aaKnown RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 IPO5O00410 1097 aaKnown RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 LAD1O00515 517 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 CTAGE5O15320 804 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 DYNC1LI2O43237 492 aaPredicted RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 ADCY6O43306 1168 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 STX6O43752 255 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 EDIL3O43854 480 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 CCNT1O60563 726 aaKnown RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 FARP2O94887 1054 aaPredicted RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 ARIH2O95376 493 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 COL6A1P12109 1028 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 RGS19P49795 217 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 ACLYP53396 1101 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 KRT76Q01546 638 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 SP2Q02086 613 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 LRRC41Q15345 812 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 DGKDQ16760 1214 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 LY6KQ17RY6 165 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 LETM2Q2VYF4 491 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 PRR16Q569H4 304 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 ZNF746Q6NUN9 644 aaPredicted RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 NECAB2Q7Z6G3 386 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 UBE2Q1Q7Z7E8 422 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 PLA2G4DQ86XP0 818 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 SMAP1Q8IYB5 467 aaPredicted RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 RDM1Q8NG50 284 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 OR6J1Q8NGC5 347 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 CYP2W1Q8TAV3 490 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 SLC5A5Q92911 643 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 TATDN2Q93075 761 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 LENG9Q96B70 501 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 PGBD1Q96JS3 809 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 ZNF577Q9BSK1 485 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 MLXIPQ9HAP2 919 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 JPH1Q9HDC5 661 aaPredicted RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 DDX25Q9UHL0 483 aaKnown RBP8.03□□□□□ -1.12
SMAD1-213ENST00000514778 TCEAL9Q9UHQ7 104 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 HTTP42858 3142 aa8.03□□□□□ -1.12
SMAD1-213ENST00000514778 DHX15O43143 795 aaKnown RBP8.02□□□□□ -1.13
SMAD1-213ENST00000514778 ATP9AO75110 1047 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 ATG7O95352 703 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 GGPS1O95749 300 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 BMP15O95972 392 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 PGK1P00558 417 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 MMP3P08254 477 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 C6orf222P0C671 652 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-213ENST00000514778 ARP10275 920 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 SFNP31947 248 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 ANP32AP39687 249 aaKnown RBP8.02□□□□□ -1.13
SMAD1-213ENST00000514778 SLC26A2P50443 739 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 GUCY1B3Q02153 619 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 PTPN11Q06124 597 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-213ENST00000514778 KCNA10Q16322 511 aa8.02□□□□□ -1.13
SMAD1-213ENST00000514778 EARS2Q5JPH6 523 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms