RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 MRGBPQ9NV56 204 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 CEP131Q9UPN4 1083 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 SNED1Q8TER0 1413 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 ZNF646O15015 1829 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 CARNS1A5YM72 827 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 KCNJ6P48051 423 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 TUFMP49411 452 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 GRAPQ13588 217 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 SLC35G1Q2M3R5 365 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 LCA5Q86VQ0 697 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 CCDC50Q8IVM0 306 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 VSTM4Q8IW00 320 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 FUT8Q9BYC5 575 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 ZWILCHQ9H900 591 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 TUBA8Q9NY65 449 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 RGPD3A6NKT7 1758 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 TRIM75PA6NK02 468 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 MCM3P25205 808 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PSMD7P51665 324 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 USP11P51784 963 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 C12orf60Q5U649 245 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 EMC10Q5UCC4 262 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 TMEM139Q8IV31 216 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 SH3RF3Q8TEJ3 882 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 CENPTQ96BT3 561 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 HVCN1Q96D96 273 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 UBE2OQ9C0C9 1292 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 LUC7LQ9NQ29 371 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 LRRC4BQ9NT99 713 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 USP21Q9UK80 565 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 B4DLN1 442 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 TBCAO75347 108 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 BBOX1O75936 387 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PDHBP11177 359 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 SLC8A1P32418 973 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 CSE1LP55060 971 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 UBASH3AP57075 661 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 ATP2C1P98194 919 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 IL17AQ16552 155 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PFKFB3Q16875 520 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PLPP6Q8IY26 295 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 GIMAP1Q8WWP7 306 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 SYMPKQ92797 1274 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PPP1R13BQ96KQ4 1090 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 GPR101Q96P66 508 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 NR1H4Q96RI1 486 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 OXCT2Q9BYC2 517 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 DHX36Q9H2U1 1008 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 RHBDL2Q9NX52 303 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PHF24Q9UPV7 400 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 NRXN2Q9P2S2 1712 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 FAM205AQ6ZU69 1335 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 M0R2N6 131 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 FSBPO95073 299 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 MYBL1P10243 752 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 ENDOUP21128 410 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 FNTAP49354 379 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 AKAP17AQ02040 695 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 TBX2Q13207 712 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 OLFM4Q6UX06 510 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 APTXQ7Z2E3 356 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 TRIM50Q86XT4 487 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 GPIHBP1Q8IV16 184 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 LMNTD2Q8IXW0 634 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 SLC15A3Q8IY34 581 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 ZBTB8BQ8NAP8 495 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PPP1R14BQ96C90 147 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 DYNLL2Q96FJ2 89 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 DHTKD1Q96HY7 919 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 C2orf49Q9BVC5 232 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 INO80BQ9C086 356 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 L2HGDHQ9H9P8 463 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 PREBQ9HCU5 417 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 MCM9Q9NXL9 1143 aa8.18□□□□□ -1.1
PDLIM5-219ENST00000514743 GREB1LQ9C091 1923 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 HSPA1AP0DMV8 641 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 HSPA1BP0DMV9 641 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 CD44P16070 742 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 ERCC5P28715 1186 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 CASP1P29466 404 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 DYNC1I2Q13409 638 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 ARHGEF6Q15052 776 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 TYW1BQ6NUM6 668 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 C15orf52Q6ZUT6 534 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 TRMT44Q8IYL2 757 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 ANKS1AQ92625 1134 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 PAGR1Q9BTK6 254 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 ABCF3Q9NUQ8 709 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 HOOK1Q9UJC3 728 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 COL11A2P13942 1736 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 PSDA5PKW4 1024 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 SART1O43290 800 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 AKR1B10O60218 316 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 HSPA8P11142 646 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 WASHC5Q12768 1159 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms