RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
CDH6-205ENST00000514738 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
CDH6-205ENST00000514738 SETD1AO15047 1707 aaKnown RBP17.64■□□□□ 0.41
CDH6-205ENST00000514738 KCNA1Q09470 495 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 VASH1Q7L8A9 365 aaPredicted RBP17.63■□□□□ 0.41
CDH6-205ENST00000514738 CCDC110Q8TBZ0 833 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 SUN5Q8TC36 379 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 GIPC2Q8TF65 315 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 CPLX3Q8WVH0 158 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 NUDCD1Q96RS6 583 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 KRT23Q9C075 422 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 GTF3C4Q9UKN8 822 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 IKBKGQ9Y6K9 419 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 RASA4BC9J798 803 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 RASA4O43374 803 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 FAM153BP0C7A2 387 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 PRKACBP22694 351 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 PPP2R5BQ15173 497 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 CTC1Q2NKJ3 1217 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 FAM153CQ494X1 144 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 GAB3Q8WWW8 586 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 DHX36Q9H2U1 1008 aaKnown RBP17.63■□□□□ 0.41
CDH6-205ENST00000514738 SAMD15Q9P1V8 674 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 FAM153AQ9UHL3 310 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 TRIM33Q9UPN9 1127 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 NUP155O75694 1391 aa17.63■□□□□ 0.41
CDH6-205ENST00000514738 ADAM23O75077 832 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 ZCCHC18P0CG32 403 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 TUBA4AP68366 448 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 CYTH1Q15438 398 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 NLRP9Q7RTR0 991 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 ACMSDQ8TDX5 336 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 NMD3Q96D46 503 aaKnown RBP17.62■□□□□ 0.41
CDH6-205ENST00000514738 ERP44Q9BS26 406 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 FHDC1Q9C0D6 1143 aaPredicted RBP17.62■□□□□ 0.41
CDH6-205ENST00000514738 FKBP14Q9NWM8 211 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 SCHIP1Q9P0W5 487 aaPredicted RBP17.62■□□□□ 0.41
CDH6-205ENST00000514738 PCDHA7Q9UN72 937 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 TBC1D30Q9Y2I9 924 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 ARID3CA6NKF2 412 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 VPS36Q86VN1 386 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 ZNF317Q96PQ6 595 aaPredicted RBP17.62■□□□□ 0.41
CDH6-205ENST00000514738 RAB3IPQ96QF0 476 aaPredicted RBP17.62■□□□□ 0.41
CDH6-205ENST00000514738 CCSER1Q9C0I3 900 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 TRIM10Q9UDY6 481 aa17.62■□□□□ 0.41
CDH6-205ENST00000514738 EFCAB6Q5THR3 1501 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 VAMP4O75379 141 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 LYNP07948 512 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 PABPC4LP0CB38 370 aaKnown RBP17.61■□□□□ 0.41
CDH6-205ENST00000514738 UBTFL6P0CB48 400 aaPredicted RBP17.61■□□□□ 0.41
CDH6-205ENST00000514738 GPC3P51654 580 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 MCCD1P59942 119 aaPredicted RBP17.61■□□□□ 0.41
CDH6-205ENST00000514738 PCSK7Q16549 785 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 ERMARDQ5T6L9 678 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 Q6ZNX1 250 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 TCF12Q99081 682 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 IVNS1ABPQ9Y6Y0 642 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 ZNF518AQ6AHZ1 1483 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 NOTOA8MTQ0 251 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 FAM47E-STBD1D6RA91 191 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 WNT7AO00755 349 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 VHLP40337 213 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 MXI1P50539 228 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 CDK7P50613 346 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 NR1D2Q14995 579 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 ADRM1Q16186 407 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 MARK2Q7KZI7 788 aaKnown RBP17.61■□□□□ 0.41
CDH6-205ENST00000514738 SUPT20HQ8NEM7 779 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 DDX54Q8TDD1 881 aaKnown RBP17.61■□□□□ 0.41
CDH6-205ENST00000514738 ELAC2Q9BQ52 826 aaKnown RBP17.61■□□□□ 0.41
CDH6-205ENST00000514738 B3GNT4Q9C0J1 378 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 PTTG2Q9NZH5 202 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 GGT7Q9UJ14 662 aa17.61■□□□□ 0.41
CDH6-205ENST00000514738 GOLGA8TH3BQL2 631 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 GOLGA8HP0CJ92 632 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 ATICP31939 592 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 BIRC3Q13489 604 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 TRIM29Q14134 588 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 FAM129AQ9BZQ8 928 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 HBS1LQ9Y450 684 aaKnown RBP17.6■□□□□ 0.41
CDH6-205ENST00000514738 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 A0A1W2PQ27 194 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 A0A1W2PQ64 194 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 A0A1W2PQD8 194 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 H0Y3Z8 333 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 CBFA2T3O75081 653 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 ZBED1O96006 694 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 DDX5P17844 614 aaKnown RBP17.6■□□□□ 0.41
CDH6-205ENST00000514738 ACADSBP45954 432 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 MTHFSP49914 203 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 LMNB2Q03252 620 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 ZBTB17Q13105 803 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 GSTA3Q16772 222 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 OLFM4Q6UX06 510 aa17.6■□□□□ 0.41
CDH6-205ENST00000514738 GFM2Q969S9 779 aaKnown RBP17.6■□□□□ 0.41
CDH6-205ENST00000514738 ITPKCQ96DU7 683 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms