RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 KCNQ5Q9NR82 932 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 LIMCH1Q9UPQ0 1083 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 AKAP12Q02952 1782 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 GOLGA8MH3BSY2 632 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 RPS6KA5O75582 802 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 MAP3K6O95382 1288 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 ALAS1P13196 640 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 FGFR4P22455 802 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 SKOR1P84550 965 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 TUBA3CQ13748 450 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 HSP90AA4PQ58FG1 418 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 C20orf194Q5TEA3 1177 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 FAM180BQ6P0A1 224 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 ATG9AQ7Z3C6 839 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 POTEDQ86YR6 584 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 TBC1D21Q8IYX1 336 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 PPM1NQ8N819 430 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 SLC22A8Q8TCC7 542 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 STK32AQ8WU08 396 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 BTBD6Q96KE9 485 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 DRC3Q9H069 523 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 BATF3Q9NR55 127 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 RHBDL2Q9NX52 303 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 MYO1AQ9UBC5 1043 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 DDX25Q9UHL0 483 aaKnown RBP7.91□□□□□ -1.14
NIPBL-208ENST00000514335 ZNF180Q9UJW8 692 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 GMEB1Q9Y692 573 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 SPATA31E1Q6ZUB1 1445 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 SERPINB3P29508 390 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 CNGA1P29973 690 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 IDUAP35475 653 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 SLC12A2P55011 1212 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 NUTM2DQ5VT03 806 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-208ENST00000514335 NXNQ6DKJ4 435 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 KIAA1683Q9H0B3 1180 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 TRPV6Q9H1D0 765 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 SMARCAD1Q9H4L7 1026 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 MMRN2Q9H8L6 949 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 GIMAP2Q9UG22 337 aa7.91□□□□□ -1.14
NIPBL-208ENST00000514335 DDX20Q9UHI6 824 aaKnown RBP7.91□□□□□ -1.14
NIPBL-208ENST00000514335 PIK3C2AO00443 1686 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 B4DLN1 442 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 CDK2AP1O14519 115 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 ADAMTS4O75173 837 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 SLC34A2O95436 690 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 NPPAP01160 153 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 ATP5OP48047 213 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 ARHGDIBP52566 201 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 TMF1P82094 1093 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 AP1B1Q10567 949 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 PPP1R7Q15435 360 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 OTUD7BQ6GQQ9 843 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 NLRP10Q86W26 655 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 GATAD2AQ86YP4 633 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 ARRDC4Q8NCT1 418 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 CCHCR1Q8TD31 782 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 DPF3Q92784 378 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 OCEL1Q9H607 264 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 DPP7Q9UHL4 492 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 SPG7Q9UQ90 795 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 PCDHB13Q9Y5F0 798 aa7.9□□□□□ -1.14
NIPBL-208ENST00000514335 ERICH2A1L162 156 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 MCF2LO15068 1137 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 ALDH1L1O75891 902 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 GALNSP34059 522 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 BASP1P80723 227 aaKnown RBP7.9□□□□□ -1.15
NIPBL-208ENST00000514335 ANKDD1AQ495B1 522 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 SPATA1Q5VX52 437 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 GALNT5Q7Z7M9 940 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 CEP57Q86XR8 500 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 C2orf69Q8N8R5 385 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF606Q8WXB4 792 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 SDCCAG3Q96C92 435 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 TSC22D3Q99576 134 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 AGO2Q9UKV8 859 aaKnown RBP7.9□□□□□ -1.15
NIPBL-208ENST00000514335 CFL2Q9Y281 166 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 TELO2Q9Y4R8 837 aa7.9□□□□□ -1.15
NIPBL-208ENST00000514335 GOLGA8JA6NMD2 632 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 GOLGA8TH3BQL2 631 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CYP2E1P05181 493 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 GLI1P08151 1106 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 GOLGA8HP0CJ92 632 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 GPC3P51654 580 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 TGFB2P61812 414 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ACY1Q03154 408 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF540Q8NDQ6 660 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CEP70Q8NHQ1 597 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ALKBH8Q96BT7 664 aaKnown RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CSRNP2Q9H175 543 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 TBC1D22BQ9NU19 505 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 PCMTD2Q9NV79 361 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 DNAI1Q9UI46 699 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ADAM21Q9UKJ8 722 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 LRRC37A3O60309 1634 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 USP19O94966 1318 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 SERPINC1P01008 464 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 HCLS1P14317 486 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ATP5JP18859 108 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 GNAQP50148 359 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 RARSP54136 660 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms