RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CDK17Q00537 523 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 CKAP4Q07065 602 aaKnown RBP13.85□□□□□ -0.19
SDHA-216ENST00000514027 EHHADHQ08426 723 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 TDRD12Q587J7 1177 aaKnown RBP13.85□□□□□ -0.19
SDHA-216ENST00000514027 MSL1Q68DK7 614 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 ZNF662Q6ZS27 426 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 PROM2Q8N271 834 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 GBP3Q9H0R5 595 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 MLXIPQ9HAP2 919 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
SDHA-216ENST00000514027 PCDHA13Q9Y5I0 950 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 COL4A3BPQ9Y5P4 624 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 GREB1LQ9C091 1923 aaPredicted RBP13.85□□□□□ -0.19
SDHA-216ENST00000514027 C10orf71Q711Q0 1435 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 NRXN2Q9P2S2 1712 aa13.85□□□□□ -0.19
SDHA-216ENST00000514027 ICA1Q05084 483 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 SEPT2Q15019 361 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
SDHA-216ENST00000514027 CCDC65Q8IXS2 484 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 EHD4Q9H223 541 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 KANSL2Q9H9L4 492 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 FAN1Q9Y2M0 1017 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 CAPN6Q9Y6Q1 641 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 COL11A2P13942 1736 aaPredicted RBP13.84□□□□□ -0.19
SDHA-216ENST00000514027 ABCB11O95342 1321 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 EIF3JO75822 258 aaKnown RBP13.84□□□□□ -0.19
SDHA-216ENST00000514027 MOCS3O95396 460 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 MMP10P09238 476 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
SDHA-216ENST00000514027 FKBP3Q00688 224 aaKnown RBP13.84□□□□□ -0.19
SDHA-216ENST00000514027 BIRC2Q13490 618 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 PRR16Q569H4 304 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 POTEGQ6S5H5 508 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 POTEEQ6S8J3 1075 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
SDHA-216ENST00000514027 NLGN1Q8N2Q7 840 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 NAP1L4Q99733 375 aaKnown RBP13.84□□□□□ -0.19
SDHA-216ENST00000514027 L1RE1Q9UN81 338 aa13.84□□□□□ -0.19
SDHA-216ENST00000514027 ANO9A1A5B4 782 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 TACC1O75410 805 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 PDE6BP35913 854 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 C2orf54Q08AI8 447 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 CASP8Q14790 479 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 MSL3Q8N5Y2 521 aaKnown RBP13.83□□□□□ -0.2
SDHA-216ENST00000514027 DCAF4Q8WV16 495 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 CCDC102AQ96A19 550 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 MASTLQ96GX5 879 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 ZDHHC15Q96MV8 337 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 PURBQ96QR8 312 aaKnown RBP13.83□□□□□ -0.2
SDHA-216ENST00000514027 PSMB7Q99436 277 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 CRACR2AQ9BSW2 395 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 PLEKHA4Q9H4M7 779 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 SH2D4AQ9H788 454 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 SH3BP1Q9Y3L3 701 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 SIPA1L1O43166 1804 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 MED24O75448 989 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 ZMYND10O75800 440 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 HNRNPH3P31942 346 aaKnown RBP13.83□□□□□ -0.2
SDHA-216ENST00000514027 USP14P54578 494 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 GFPT1Q06210 699 aaPredicted RBP13.83□□□□□ -0.2
SDHA-216ENST00000514027 ZCWPW2Q504Y3 356 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 ANKRD13CQ8N6S4 541 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 TRIM58Q8NG06 486 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 BAP1Q92560 729 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 FAXDC2Q96IV6 333 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 LSM14BQ9BX40 385 aaKnown RBP13.83□□□□□ -0.2
SDHA-216ENST00000514027 GLT8D2Q9H1C3 349 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 DHX36Q9H2U1 1008 aaKnown RBP13.83□□□□□ -0.2
SDHA-216ENST00000514027 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
SDHA-216ENST00000514027 FAM198AQ9UFP1 575 aa13.83□□□□□ -0.2
SDHA-216ENST00000514027 MEIS1O00470 390 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 N4BP1O75113 896 aaKnown RBP13.82□□□□□ -0.2
SDHA-216ENST00000514027 EPS15P42566 896 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 NAP1L1P55209 391 aaKnown RBP13.82□□□□□ -0.2
SDHA-216ENST00000514027 ARHGAP4P98171 946 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 HYIQ5T013 277 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 GBP6Q6ZN66 633 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 GIMAP7Q8NHV1 300 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 MIEF2Q96C03 454 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 ALS2CR12Q96Q35 445 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 KCNMB3Q9NPA1 279 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 KLHL33A6NCF5 533 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
SDHA-216ENST00000514027 MEIS2O14770 477 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 ECE2O60344 883 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 TUBBP07437 444 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 CYP11B2P19099 503 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 USP11P51784 963 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 APBA1Q02410 837 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 KCNMA1Q12791 1236 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 ENOX2Q16206 610 aaKnown RBP13.82□□□□□ -0.2
SDHA-216ENST00000514027 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
SDHA-216ENST00000514027 WDR93Q6P2C0 686 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms