RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ATG4CQ96DT6 458 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 POLR3CQ9BUI4 534 aaPredicted RBP11.09□□□□□ -0.63
TPM3-221ENST00000513769 WDR11Q9BZH6 1224 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 ELP3Q9H9T3 547 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 TBC1D22BQ9NU19 505 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 KDM3AQ9Y4C1 1321 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 PHIPQ8WWQ0 1821 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 FAM86B1E9PN63 330 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 GFRA3O60609 400 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 FAM86B2P0C5J1 330 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 ZBTB48P10074 688 aaPredicted RBP11.08□□□□□ -0.64
TPM3-221ENST00000513769 HSPA8P11142 646 aaKnown RBP11.08□□□□□ -0.64
TPM3-221ENST00000513769 CETPP11597 493 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 INHBEP58166 350 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 RPS6P62753 249 aaKnown RBP11.08□□□□□ -0.64
TPM3-221ENST00000513769 PSMD2Q13200 908 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 PPP2R5CQ13362 524 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 PNOCQ13519 176 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 LAPTM4AQ15012 233 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 IQCB1Q15051 598 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 HS1BP3Q53T59 392 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 OTOP1Q7RTM1 612 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 VSIG10LQ86VR7 867 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 SLC5A5Q92911 643 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 LENG9Q96B70 501 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 ABHD8Q96I13 439 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 CDHR1Q96JP9 859 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 P2RX7Q99572 595 aaKnown RBP11.08□□□□□ -0.64
TPM3-221ENST00000513769 BEGAINQ9BUH8 593 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 ACAD9Q9H845 621 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 UBIAD1Q9Y5Z9 338 aa11.08□□□□□ -0.64
TPM3-221ENST00000513769 A0A087X0B3 334 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 MSH4O15457 936 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 PSMD10O75832 226 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 IRX3P78415 501 aaPredicted RBP11.07□□□□□ -0.64
TPM3-221ENST00000513769 COBLL1Q53SF7 1204 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 NAALADL2Q58DX5 795 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 SNRNP48Q6IEG0 339 aaKnown RBP11.07□□□□□ -0.64
TPM3-221ENST00000513769 NLRX1Q86UT6 975 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 PLA2G4DQ86XP0 818 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 ENOX1Q8TC92 643 aaKnown RBP11.07□□□□□ -0.64
TPM3-221ENST00000513769 RMDN3Q96TC7 470 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 MPHOSPH6Q99547 160 aaKnown RBP11.07□□□□□ -0.64
TPM3-221ENST00000513769 MMTAG2Q9BU76 263 aaKnown RBP11.07□□□□□ -0.64
TPM3-221ENST00000513769 CBX8Q9HC52 389 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 GBA2Q9HCG7 927 aaPredicted RBP11.07□□□□□ -0.64
TPM3-221ENST00000513769 TUFT1Q9NNX1 390 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 RNF146Q9NTX7 359 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
TPM3-221ENST00000513769 FZD1Q9UP38 647 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 PFASO15067 1338 aa11.07□□□□□ -0.64
TPM3-221ENST00000513769 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 NFIBO00712 420 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 CDC25AP30304 524 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 AFMP43652 599 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 GCLCP48506 637 aaPredicted RBP11.06□□□□□ -0.64
TPM3-221ENST00000513769 GRM1Q13255 1194 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 BAATQ14032 418 aaPredicted RBP11.06□□□□□ -0.64
TPM3-221ENST00000513769 KARSQ15046 597 aaKnown RBP11.06□□□□□ -0.64
TPM3-221ENST00000513769 PGM5Q15124 567 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 EPHA7Q15375 998 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 MUM1L1Q5H9M0 696 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 ZNF658Q5TYW1 1059 aaPredicted RBP11.06□□□□□ -0.64
TPM3-221ENST00000513769 ARHGEF16Q5VV41 709 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 SARM1Q6SZW1 724 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 GADL1Q6ZQY3 521 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 SHCBP1Q8NEM2 672 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 RDM1Q8NG50 284 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 NEK9Q8TD19 979 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 PDLIM2Q96JY6 352 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 TAAR1Q96RJ0 339 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 HSD17B14Q9BPX1 270 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 PDCD2LQ9BRP1 358 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 ASCC2Q9H1I8 757 aaPredicted RBP11.06□□□□□ -0.64
TPM3-221ENST00000513769 DNAJC25Q9H1X3 360 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 MROH8Q9H579 483 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 ZCCHC17Q9NP64 241 aaKnown RBP11.06□□□□□ -0.64
TPM3-221ENST00000513769 PXMP2Q9NR77 195 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 MAN1B1Q9UKM7 699 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 DNM3Q9UQ16 869 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
TPM3-221ENST00000513769 CCDC85CA6NKD9 419 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 IPO5O00410 1097 aaKnown RBP11.05□□□□□ -0.64
TPM3-221ENST00000513769 STRNO43815 780 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 EIF3JO75822 258 aaKnown RBP11.05□□□□□ -0.64
TPM3-221ENST00000513769 RHOBTB3O94955 611 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 NR3C2P08235 984 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 TGFB3P10600 412 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 CCND2P30279 289 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 HERVK_113P62684 666 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 CCNA1P78396 465 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 SPIRE1Q08AE8 756 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 GRB10Q13322 594 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 MOGSQ13724 837 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms