RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 MYCLP12524 364 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 SEPT14Q6ZU15 432 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 SDCCAG8Q86SQ7 713 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 TTC16Q8NEE8 873 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 CCDC110Q8TBZ0 833 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 MAP3K14Q99558 947 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 OVOS2A0A0J9YW53 1432 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 OVOS2Q6IE36 1432 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ZNF804BA4D1E1 1349 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 SFI1A8K8P3 1242 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ZRANB2O95218 330 aaKnown RBP eCLIP8.42□□□□□ -1.061e-6■■■■■ 42
CLCN3-209ENST00000513761 SRGNP10124 158 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 PDE6CP51160 858 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ZNF653Q96CK0 615 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 NEXMIFQ5QGS0 1516 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 OPHN1O60890 802 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 TMOD1P28289 359 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 PSMC2P35998 433 aaKnown RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 C10orf76Q5T2E6 689 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 FAM47EQ6ZV65 393 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 MARCH10Q8NA82 808 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 P3H4Q92791 437 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 TRIM6Q9C030 488 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 PCIF1Q9H4Z3 704 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 USP40Q9NVE5 1235 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 EXOC7Q9UPT5 735 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 NRXN1Q9ULB1 1477 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 TNNI1P19237 187 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PSMC4P43686 418 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 CRKLP46109 303 aaKnown RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PSMD2Q13200 908 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 C6orf118Q5T5N4 469 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 SLC44A5Q8NCS7 719 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 RNPC3Q96LT9 517 aaKnown RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 TRIM4Q9C037 500 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 STK24Q9Y6E0 443 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 WDR91A4D1P6 747 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PHF20L1A8MW92 1017 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PDIA6Q15084 440 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 RBBP5Q15291 538 aaKnown RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 FOXP4Q8IVH2 680 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 CPXCR1Q8N123 301 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PIGBQ92521 554 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 VCX3BQ9H321 246 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 SH2D4AQ9H788 454 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 TMEM260Q9NX78 707 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 NOC2LQ9Y3T9 749 aaKnown RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PLEKP08567 350 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 UBXN2AP68543 259 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 KCNH2Q12809 1159 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PHLDB3Q6NSJ2 640 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 ARHGEF18Q6ZSZ5 1173 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 RAB3IL1Q8TBN0 382 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PHF20Q9BVI0 1012 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 YIPF3Q9GZM5 350 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 INTUQ9ULD6 942 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 PRDX5P30044 214 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 IL6STP40189 918 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 SCNN1DP51172 638 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 STK4Q13043 487 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 ERFEQ4G0M1 354 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 STAG2Q8N3U4 1231 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 CD248Q9HCU0 757 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 UBE2TQ9NPD8 197 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 ANAPC5Q9UJX4 755 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 ARAP3Q8WWN8 1544 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 ADCY2Q08462 1091 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 EZH2Q15910 746 aaKnown RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 TRAPPC11Q7Z392 1133 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 CHMP6Q96FZ7 201 aa8.41□□□□□ -1.06
CLCN3-209ENST00000513761 EPB41L4AQ9HCS5 686 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-209ENST00000513761 A0A0U1RQJ8 604 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 CD19P15391 556 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 POLE2P56282 527 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 SLMAPQ14BN4 828 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 PDXDC1Q6P996 788 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 MIPOL1Q8TD10 442 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 ARL8AQ96BM9 186 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 E9PMD0 336 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 TOB1P50616 345 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-209ENST00000513761 ITIH3Q06033 890 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 RCN2Q14257 317 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 PSMD6Q15008 389 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 FAM102BQ5T8I3 360 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 DDX42Q86XP3 938 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLCN3-209ENST00000513761 RAB20Q9NX57 234 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 SUFUQ9UMX1 484 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 COASYQ13057 564 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 NBPF9Q3BBW0 867 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.06
CLCN3-209ENST00000513761 WDR93Q6P2C0 686 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 RSAD2Q8WXG1 361 aa8.4□□□□□ -1.06
CLCN3-209ENST00000513761 RBM17Q96I25 401 aaKnown RBP8.4□□□□□ -1.06
CLCN3-209ENST00000513761 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLCN3-209ENST00000513761 ISCA1Q9BUE6 129 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms