RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 SMRP1Q8NCR6 262 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 SPATA33Q96N06 139 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 C16orf70Q9BSU1 422 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 FSD1Q9BTV5 496 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 RC3H2Q9HBD1 1191 aaKnown RBP10.51□□□□□ -0.73
CAST-239ENST00000513666 TOMM22Q9NS69 142 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 ADGRA3Q8IWK6 1321 aa10.51□□□□□ -0.73
CAST-239ENST00000513666 PROB1E7EW31 1015 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 TREHO43280 583 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 CTSHP09668 335 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 EIF2AK2P19525 551 aaKnown RBP10.5□□□□□ -0.73
CAST-239ENST00000513666 AVPR2P30518 371 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 RRP1P56182 461 aaKnown RBP10.5□□□□□ -0.73
CAST-239ENST00000513666 COASYQ13057 564 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 CAMK1Q14012 370 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 CDC37Q16543 378 aaPredicted RBP10.5□□□□□ -0.73
CAST-239ENST00000513666 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
CAST-239ENST00000513666 CELF3Q5SZQ8 465 aaKnown RBP10.5□□□□□ -0.73
CAST-239ENST00000513666 SPNS2Q8IVW8 549 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 PPP2R3CQ969Q6 453 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 ASIC4Q96FT7 647 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 TTC14Q96N46 770 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 PXMP2Q9NR77 195 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 CLEC1BQ9P126 229 aa10.5□□□□□ -0.73
CAST-239ENST00000513666 RIF1Q5UIP0 2472 aaKnown RBP10.5□□□□□ -0.73
CAST-239ENST00000513666 RGS20O76081 388 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 GGPS1O95749 300 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 GOLGA8HP0CJ92 632 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 SMIM10L2AP0DMW4 78 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 SMIM10L2BP0DMW5 78 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 ALX1Q15699 326 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 FAM26DQ5JW98 314 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 VPS53Q5VIR6 699 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 KCNV1Q6PIU1 500 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 EFHBQ8N7U6 833 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 CPVLQ9H3G5 476 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 RNPEPQ9H4A4 650 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 PLAGL2Q9UPG8 496 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 TTC41PQ6P2S7 1318 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 FAM186AA6NE01 2351 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 MYH6P13533 1939 aa10.49□□□□□ -0.73
CAST-239ENST00000513666 H3BRB1 525 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 SORBS3O60504 671 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 CSPG5O95196 566 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 HSPD1P10809 573 aaKnown RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 ERMP1Q7Z2K6 904 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 PI4K2BQ8TCG2 481 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 P2RX5Q93086 422 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 ZNF689Q96CS4 500 aaPredicted RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 PHF7Q9BWX1 381 aaPredicted RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 TUT1Q9H6E5 874 aaKnown RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 MRPL11Q9Y3B7 192 aaKnown RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 USP15Q9Y4E8 981 aaPredicted RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 KIAA1671Q9BY89 1806 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 H0Y858 1186 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 LGALS2P05162 132 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 UBA1P22314 1058 aaKnown RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 ICAM3P32942 547 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 SP2Q02086 613 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
CAST-239ENST00000513666 ASCL5Q7RTU5 278 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 ADGRD2Q7Z7M1 963 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 ADGRF4Q8IZF3 695 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 PDCD2LQ9BRP1 358 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 DCTPP1Q9H773 170 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 TLR9Q9NR96 1032 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 TTC3P53804 2025 aa10.48□□□□□ -0.73
CAST-239ENST00000513666 CCDC171Q6TFL3 1326 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 GLP2RO95838 553 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 CFBP00751 764 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 ITGB1P05556 798 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 TGFB3P10600 412 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 GNAT1P11488 350 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
CAST-239ENST00000513666 ATF7P17544 494 aaPredicted RBP10.47□□□□□ -0.73
CAST-239ENST00000513666 DNAJB1P25685 340 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 HSD17B4P51659 736 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 GHRHRQ02643 423 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 PTPN21Q16825 1174 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 QRICH1Q2TAL8 776 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 NAALADL2Q58DX5 795 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 SPPL3Q8TCT6 385 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 RPGRIP1Q96KN7 1286 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 EHMT1Q9H9B1 1298 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 MLXIPQ9HAP2 919 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 SETD4Q9NVD3 440 aa10.47□□□□□ -0.73
CAST-239ENST00000513666 BARX2Q9UMQ3 279 aaPredicted RBP10.47□□□□□ -0.73
CAST-239ENST00000513666 PRR23AA6NEV1 266 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 ENPP3O14638 875 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 OPLAHO14841 1288 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 DGKIO75912 1065 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 FGAP02671 866 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 CHRNA1P02708 482 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 GHRP10912 638 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 NRIP1P48552 1158 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 ADAM17P78536 824 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.74
CAST-239ENST00000513666 VSIG10LQ86VR7 867 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms