RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 LMBR1Q8WVP7 490 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 WNT8BQ93098 351 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 TOP1MTQ969P6 601 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 MRPL38Q96DV4 380 aaKnown RBP12.6□□□□□ -0.39
SKP2-207ENST00000513263 UBE2ZQ9H832 354 aaPredicted RBP12.6□□□□□ -0.39
SKP2-207ENST00000513263 PSTPIP2Q9H939 334 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
SKP2-207ENST00000513263 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
SKP2-207ENST00000513263 MTUS1Q9ULD2 1270 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 SLC12A7Q9Y666 1083 aa12.6□□□□□ -0.39
SKP2-207ENST00000513263 M0QZ92 97 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 SH2B2O14492 632 aaPredicted RBP12.59□□□□□ -0.39
SKP2-207ENST00000513263 MEIS2O14770 477 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 ARHGEF15O94989 841 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 CTSHP09668 335 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 ANTXR2P58335 489 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 ZNF200P98182 395 aaPredicted RBP12.59□□□□□ -0.39
SKP2-207ENST00000513263 PPFIA1Q13136 1202 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 LEXMQ3ZCV2 418 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 FAM26DQ5JW98 314 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 FAM117BQ6P1L5 589 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 SEPT1Q8WYJ6 367 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 FTHL17Q9BXU8 183 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 SMARCAD1Q9H4L7 1026 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 TUBE1Q9UJT0 475 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 SQORQ9Y6N5 450 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 EVPLQ92817 2033 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 C5orf42Q9H799 3197 aa12.59□□□□□ -0.39
SKP2-207ENST00000513263 MUC6Q6W4X9 2439 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 RRN3P2A6NIE6 340 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 SORBS3O60504 671 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 FOSP01100 380 aaPredicted RBP12.58□□□□□ -0.4
SKP2-207ENST00000513263 RB1P06400 928 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.4
SKP2-207ENST00000513263 SEMA3FQ13275 785 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 SLC35G1Q2M3R5 365 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 EPC2Q52LR7 807 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 USP17L6PQ6QN14 398 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 GLG1Q92896 1179 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
SKP2-207ENST00000513263 PPP2R3CQ969Q6 453 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 C11orf84Q9BUA3 381 aaPredicted RBP12.58□□□□□ -0.4
SKP2-207ENST00000513263 AZI2Q9H6S1 392 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 SENP2Q9HC62 589 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 SETD4Q9NVD3 440 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 RTEL1Q9NZ71 1219 aa12.58□□□□□ -0.4
SKP2-207ENST00000513263 H3BNC9 293 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 KCNA2P16389 499 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 SLC26A2P50443 739 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 RCAN1P53805 252 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 ADAM17P78536 824 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
SKP2-207ENST00000513263 IER5Q5VY09 327 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 KRT40Q6A162 431 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
SKP2-207ENST00000513263 TMTC3Q6ZXV5 915 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 TMCO2Q7Z6W1 182 aaPredicted RBP12.57□□□□□ -0.4
SKP2-207ENST00000513263 TRIM50Q86XT4 487 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 PIBF1Q8WXW3 757 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 IL17RAQ96F46 866 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 SDF4Q9BRK5 362 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 C17orf80Q9BSJ5 609 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 NSUN3Q9H649 340 aaKnown RBP12.57□□□□□ -0.4
SKP2-207ENST00000513263 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
SKP2-207ENST00000513263 ADGRA3Q8IWK6 1321 aa12.57□□□□□ -0.4
SKP2-207ENST00000513263 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.56□□□□□ -0.4
SKP2-207ENST00000513263 MBLAC1A4D2B0 266 aaPredicted RBP12.56□□□□□ -0.4
SKP2-207ENST00000513263 C5orf67F2Z3F1 127 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 PLA2G5P39877 138 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 SP4Q02446 784 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 GPM6BQ13491 265 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 HIC1Q14526 733 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 GRIK4Q16099 956 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 TMEM31Q5JXX7 168 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 TSHZ1Q6ZSZ6 1077 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 HEATR3Q7Z4Q2 680 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 FIBCD1Q8N539 461 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 BANK1Q8NDB2 785 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
SKP2-207ENST00000513263 FAM122AQ96E09 287 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
SKP2-207ENST00000513263 MYL10Q9BUA6 226 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 ANO2Q9NQ90 1003 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 JADE2Q9NQC1 790 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 PRKAG3Q9UGI9 489 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 SUPT16HQ9Y5B9 1047 aaKnown RBP12.56□□□□□ -0.4
SKP2-207ENST00000513263 NFASCO94856 1347 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 TRIOO75962 3097 aa12.56□□□□□ -0.4
SKP2-207ENST00000513263 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
SKP2-207ENST00000513263 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 UPP2O95045 317 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms