RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 EPHX2P34913 555 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 ADD1P35611 737 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 LIFRP42702 1097 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 SATB1Q01826 763 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 IQCB1Q15051 598 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 TUBB8Q3ZCM7 444 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 CFAP221Q4G0U5 840 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 ANGEL2Q5VTE6 544 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 BSPRYQ5W0U4 402 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 INTS8Q75QN2 995 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 SCN4BQ8IWT1 228 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 GDAP1Q8TB36 358 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 EDC3Q96F86 508 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 CAPZA3Q96KX2 299 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 TIPINQ9BVW5 301 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 SMARCAD1Q9H4L7 1026 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 LZTFL1Q9NQ48 299 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 NXF1Q9UBU9 619 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 ZNF70Q9UC06 446 aaPredicted RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 FNDC3AQ9Y2H6 1198 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 SHROOM2Q13796 1616 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 SYNJ2BP-COX16A0A087WUM0 186 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 CLDN3O15551 220 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 AFPP02771 609 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 TXNP10599 105 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 KCNA4P22459 653 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 PTPN12Q05209 780 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 PRR5LQ6MZQ0 368 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 RFX6Q8HWS3 928 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 PCSK9Q8NBP7 692 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 GIMAP7Q8NHV1 300 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 HEXIM2Q96MH2 286 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 MRPL4Q9BYD3 311 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 SLC7A5P2Q9GIP4 190 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 BLZF1Q9H2G9 400 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 COX16Q9P0S2 106 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 SRPRBQ9Y5M8 271 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 KIAA0391O15091 583 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 SART1O43290 800 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 EFNA5P52803 228 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 TSTA3Q13630 321 aaPredicted RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 RASGRF1Q13972 1273 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 LONRF2Q1L5Z9 754 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 RAB42Q8N4Z0 105 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 OR8K1Q8NGG5 319 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 ATRIPQ8WXE1 791 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 KRT12Q99456 494 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 F5H6K3 240 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 DYNC1LI2O43237 492 aaPredicted RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 PPP6R2O75170 966 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 C6orf222P0C671 652 aaPredicted RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 KLRC3Q07444 240 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 MORC3Q14149 939 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 CELF1Q92879 486 aaKnown RBP4.61□□□□□ -1.67
VCAN-209ENST00000513016 GJA10Q969M2 543 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 DYNLL2Q96FJ2 89 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 HAUS8Q9BT25 410 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 NLRC4Q9NPP4 1024 aa4.61□□□□□ -1.67
VCAN-209ENST00000513016 KRT3P12035 628 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 IFNAR1P17181 557 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 RCAN1P53805 252 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 THOC5Q13769 683 aaKnown RBP4.6□□□□□ -1.67
VCAN-209ENST00000513016 ZNF568Q3ZCX4 644 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 DNAJC24Q6P3W2 148 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 APOA5Q6Q788 366 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 YY1P25490 414 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 MAPK4P31152 587 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 GPC3P51654 580 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 AMPD2Q01433 879 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 CPLX4Q7Z7G2 160 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 SDCCAG8Q86SQ7 713 aaPredicted RBP4.6□□□□□ -1.67
VCAN-209ENST00000513016 ARHGAP24Q8N264 748 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 SCYL1Q96KG9 808 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 GPR101Q96P66 508 aaPredicted RBP4.6□□□□□ -1.67
VCAN-209ENST00000513016 MYOZ2Q9NPC6 264 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 SPDYE2BA6NHP3 402 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 SMIM23A6NLE4 172 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 CTNND1O60716 968 aaKnown RBP4.6□□□□□ -1.67
VCAN-209ENST00000513016 TADA2AO75478 443 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 SPDYE6P0CI01 402 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 PDIA3P30101 505 aaKnown RBP4.6□□□□□ -1.67
VCAN-209ENST00000513016 INHBEP58166 350 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 PSMC5P62195 406 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 GLB1LQ6UWU2 654 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 TOGARAM2Q6ZUX3 1019 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 CTAGE3PQ8IX95 158 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 VPS37BQ9H9H4 285 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 FAN1Q9Y2M0 1017 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 ZMYM4Q5VZL5 1548 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 BTBD18B2RXH4 712 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 KCNJ18B7U540 433 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 IKBKBO14920 756 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 EIF3DO15371 548 aaKnown RBP eCLIP4.6□□□□□ -1.67
VCAN-209ENST00000513016 PRPSAP2O60256 369 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 APOEP02649 317 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 GSTA1P08263 222 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 GSTA2P09210 222 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 PLA2G4BP0C869 781 aa4.6□□□□□ -1.67
VCAN-209ENST00000513016 HSPA8P11142 646 aaKnown RBP4.6□□□□□ -1.67
VCAN-209ENST00000513016 DDX5P17844 614 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms