RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 PDGFAP04085 211 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 TOP1P11387 765 aaKnown RBP11.08□□□□□ -0.64
TRIO-220ENST00000512979 SDSP20132 328 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 CST5P28325 142 aaPredicted RBP11.08□□□□□ -0.64
TRIO-220ENST00000512979 SLC16A2P36021 539 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 RELBQ01201 579 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 NUCB1Q02818 461 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 SHHQ15465 462 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 ENOX2Q16206 610 aaKnown RBP11.08□□□□□ -0.64
TRIO-220ENST00000512979 C9orf50Q5SZB4 431 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 CCSAPQ6IQ19 270 aaPredicted RBP11.08□□□□□ -0.64
TRIO-220ENST00000512979 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 EXOC6Q8TAG9 804 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 ZSCAN10Q96SZ4 725 aaPredicted RBP11.08□□□□□ -0.64
TRIO-220ENST00000512979 KATNBL1Q9H079 304 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 TCP11L1Q9NUJ3 509 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 MTMR10Q9NXD2 777 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 FRMPD2Q68DX3 1309 aaPredicted RBP11.08□□□□□ -0.64
TRIO-220ENST00000512979 LTBP2Q14767 1821 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.07□□□□□ -0.64
TRIO-220ENST00000512979 ASB14A6NK59 587 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 DCDC2CA8MYV0 355 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 KIAA0355O15063 1070 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 SORBS3O60504 671 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 ICAM1P05362 532 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 ASGR1P07306 291 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 RAG1P15918 1043 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 ITGB8P26012 769 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 GJA9P57773 515 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 DAB2P98082 770 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 PSMD2Q13200 908 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 NAALADL2Q58DX5 795 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 GNASQ5JWF2 1037 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 AKNAD1Q5T1N1 836 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 NSMFQ6X4W1 530 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 MFSD6Q6ZSS7 791 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 NOL8Q76FK4 1167 aaKnown RBP11.07□□□□□ -0.64
TRIO-220ENST00000512979 ANKRD33Q7Z3H0 272 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 TBC1D10CQ8IV04 446 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 PCSK9Q8NBP7 692 aaKnown RBP11.07□□□□□ -0.64
TRIO-220ENST00000512979 SLC17A8Q8NDX2 589 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 SREK1Q8WXA9 508 aaKnown RBP11.07□□□□□ -0.64
TRIO-220ENST00000512979 DRC1Q96MC2 740 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 GLT1D1Q96MS3 346 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 NIFKQ9BYG3 293 aaKnown RBP11.07□□□□□ -0.64
TRIO-220ENST00000512979 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
TRIO-220ENST00000512979 RANBP17Q9H2T7 1088 aaKnown RBP11.07□□□□□ -0.64
TRIO-220ENST00000512979 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 TMEM39AQ9NV64 488 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 CYP39A1Q9NYL5 469 aa11.07□□□□□ -0.64
TRIO-220ENST00000512979 ZIC2O95409 532 aaPredicted RBP11.06□□□□□ -0.64
TRIO-220ENST00000512979 PDHBP11177 359 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 PCP11498 1178 aaKnown RBP11.06□□□□□ -0.64
TRIO-220ENST00000512979 TNFAIP2Q03169 654 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 FAAP100Q0VG06 881 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 TMEM214Q6NUQ4 689 aaKnown RBP11.06□□□□□ -0.64
TRIO-220ENST00000512979 CWC27Q6UX04 472 aaKnown RBP11.06□□□□□ -0.64
TRIO-220ENST00000512979 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 TOX2Q96NM4 488 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 RNF41Q9H4P4 317 aaPredicted RBP11.06□□□□□ -0.64
TRIO-220ENST00000512979 ZNF395Q9H8N7 513 aaPredicted RBP11.06□□□□□ -0.64
TRIO-220ENST00000512979 DIAPH3Q9NSV4 1193 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 VTI1BQ9UEU0 232 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 DDX49Q9Y6V7 483 aaKnown RBP11.06□□□□□ -0.64
TRIO-220ENST00000512979 MCM3APO60318 1980 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 ASTN1O14525 1302 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 ELP1O95163 1332 aa11.06□□□□□ -0.64
TRIO-220ENST00000512979 A0A0U1RQG5 324 aaPredicted RBP11.05□□□□□ -0.64
TRIO-220ENST00000512979 ZNF213O14771 459 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 BEX3Q00994 111 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 FOXC1Q12948 553 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
TRIO-220ENST00000512979 EEPD1Q7L9B9 569 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 TLK2Q86UE8 772 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 FBXO16Q8IX29 292 aaPredicted RBP11.05□□□□□ -0.64
TRIO-220ENST00000512979 ESR2Q92731 530 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 TTC14Q96N46 770 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 KLF16Q9BXK1 252 aaPredicted RBP11.05□□□□□ -0.64
TRIO-220ENST00000512979 NEDD4P46934 1319 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 MROH7Q68CQ1 1323 aa11.05□□□□□ -0.64
TRIO-220ENST00000512979 DNAH12Q6ZR08 3092 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 PTPDC1A2A3K4 754 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 ARVCFO00192 962 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 HIP1O00291 1037 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 NFIBO00712 420 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 CTAGE5O15320 804 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 SMPD1P17405 629 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 PTGS1P23219 599 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 TXLNAP40222 546 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 CDK7P50613 346 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 EPHB4P54760 987 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
TRIO-220ENST00000512979 FPGSQ05932 587 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 ZNF543Q08ER8 600 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 BAATQ14032 418 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms