RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 EHMT1Q9H9B1 1298 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 LY9Q9HBG7 655 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 ERAP1Q9NZ08 941 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 MTUS1Q9ULD2 1270 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
VEGFA-216ENST00000512683 TRANK1O15050 2925 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.44□□□□□ -0.1
VEGFA-216ENST00000512683 RRN3P2A6NIE6 340 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 ANTXR2P58335 489 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 ARHGAP4P98171 946 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 COL19A1Q14993 1142 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 FAM178BQ8IXR5 827 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 TMEM192Q8IY95 271 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 BANK1Q8NDB2 785 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 NEK9Q8TD19 979 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 LMBR1Q8WVP7 490 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 C17orf80Q9BSJ5 609 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 LRFN3Q9BTN0 628 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 LSG1Q9H089 658 aaKnown RBP14.44□□□□□ -0.1
VEGFA-216ENST00000512683 SMARCAD1Q9H4L7 1026 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 BCAS3Q9H6U6 928 aa14.44□□□□□ -0.1
VEGFA-216ENST00000512683 MBLAC1A4D2B0 266 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-216ENST00000512683 CCDC69A6NI79 296 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 C5orf67F2Z3F1 127 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 SORBS3O60504 671 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 ALADP13716 330 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 GPM6BQ13491 265 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-216ENST00000512683 UTP14CQ5TAP6 766 aaKnown RBP14.43□□□□□ -0.1
VEGFA-216ENST00000512683 GJD3Q8N144 294 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 FIBCD1Q8N539 461 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 TET1Q8NFU7 2136 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-216ENST00000512683 PABPC5Q96DU9 382 aaKnown RBP14.43□□□□□ -0.1
VEGFA-216ENST00000512683 ZFP91Q96JP5 570 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-216ENST00000512683 EPHX3Q9H6B9 360 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 HCN4Q9Y3Q4 1203 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 UBIAD1Q9Y5Z9 338 aa14.43□□□□□ -0.1
VEGFA-216ENST00000512683 GRXCR2A6NFK2 248 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 SPDYE3A6NKU9 549 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 PRC1O43663 620 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 CHRNA1P02708 482 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 KCNA2P16389 499 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 KCNA5P22460 613 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 TCF7P36402 384 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-216ENST00000512683 BMPR1AP36894 532 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 NAALADL2Q58DX5 795 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 IER5Q5VY09 327 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 NFXL1Q6ZNB6 911 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-216ENST00000512683 SRBD1Q8N5C6 995 aaKnown RBP14.42□□□□□ -0.1
VEGFA-216ENST00000512683 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 C11orf84Q9BUA3 381 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-216ENST00000512683 PLVAPQ9BX97 442 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 FTHL17Q9BXU8 183 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 GLT8D2Q9H1C3 349 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 NSUN3Q9H649 340 aaKnown RBP14.42□□□□□ -0.1
VEGFA-216ENST00000512683 JADE2Q9NQC1 790 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 PRKAG3Q9UGI9 489 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 SLC12A7Q9Y666 1083 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 XIRP2A4UGR9 3374 aa14.42□□□□□ -0.1
VEGFA-216ENST00000512683 SH2B2O14492 632 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-216ENST00000512683 ENPP3O14638 875 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 ATP9AO75110 1047 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 UPP2O95045 317 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 FOSP01100 380 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-216ENST00000512683 CTSHP09668 335 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 ITGB5P18084 799 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 PPFIA1Q13136 1202 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 MTMR1Q13613 665 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 NECTIN1Q15223 517 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 BMP2KLQ5H9B9 411 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 PTCRAQ6ISU1 281 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-216ENST00000512683 SYNE3Q6ZMZ3 975 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 NME8Q8N427 588 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 FANCBQ8NB91 859 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 GLG1Q92896 1179 aa14.41□□□□□ -0.1
VEGFA-216ENST00000512683 CLP1Q92989 425 aaKnown RBP14.41□□□□□ -0.1
VEGFA-216ENST00000512683 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-216ENST00000512683 GSTTP1A0A1W2PQM5 241 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 SLC26A2P50443 739 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 MGAT3Q09327 533 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 GRIK4Q16099 956 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 PLPPR4Q7Z2D5 763 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 TRIM50Q86XT4 487 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 AZI2Q9H6S1 392 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 TUBE1Q9UJT0 475 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 PCDHA6Q9UN73 950 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 PCDHA8Q9Y5H6 950 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 SCN5AQ14524 2016 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 TANC1Q9C0D5 1861 aa14.4□□□□□ -0.1
VEGFA-216ENST00000512683 PRR33A8MZF0 331 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 hCG_1984214I3L0E3 225 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 SLC27A2O14975 620 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 LPIN1Q14693 890 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 FBXO47Q5MNV8 452 aa14.39□□□□□ -0.11
VEGFA-216ENST00000512683 MARCH8Q5T0T0 291 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms