RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 TMEM214Q6NUQ4 689 aaKnown RBP8.43□□□□□ -1.06
USP46-208ENST00000512656 MFSD6Q6ZSS7 791 aa8.43□□□□□ -1.06
USP46-208ENST00000512656 TLK2Q86UE8 772 aa8.43□□□□□ -1.06
USP46-208ENST00000512656 MAFAQ8NHW3 353 aaPredicted RBP8.43□□□□□ -1.06
USP46-208ENST00000512656 RHBDD1Q8TEB9 315 aa8.43□□□□□ -1.06
USP46-208ENST00000512656 TMEM47Q9BQJ4 181 aa8.43□□□□□ -1.06
USP46-208ENST00000512656 RANBP17Q9H2T7 1088 aaKnown RBP8.43□□□□□ -1.06
USP46-208ENST00000512656 RWDD1Q9H446 243 aaPredicted RBP8.43□□□□□ -1.06
USP46-208ENST00000512656 INCENPQ9NQS7 918 aa8.43□□□□□ -1.06
USP46-208ENST00000512656 GNEQ9Y223 722 aaKnown RBP8.43□□□□□ -1.06
USP46-208ENST00000512656 CCDC171Q6TFL3 1326 aa8.43□□□□□ -1.06
USP46-208ENST00000512656 CHD9Q3L8U1 2897 aa8.43□□□□□ -1.06
USP46-208ENST00000512656 BDP1A6H8Y1 2624 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 PRUNE2Q8WUY3 3088 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 A0A0D9SFI3 127 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 PTPDC1A2A3K4 754 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 CTAGE5O15320 804 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 HSPD1P10809 573 aaKnown RBP8.42□□□□□ -1.06
USP46-208ENST00000512656 FOSL2P15408 326 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 SLC16A2P36021 539 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 MAP2K3P46734 347 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 SNAP25P60880 206 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 BEX3Q00994 111 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 SEMA3FQ13275 785 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 NMIQ13287 307 aaPredicted RBP8.42□□□□□ -1.06
USP46-208ENST00000512656 ITGA7Q13683 1181 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 BAATQ14032 418 aaPredicted RBP8.42□□□□□ -1.06
USP46-208ENST00000512656 MUM1L1Q5H9M0 696 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 AKNAD1Q5T1N1 836 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 GPATCH4Q5T3I0 446 aaKnown RBP8.42□□□□□ -1.06
USP46-208ENST00000512656 CXCL17Q6UXB2 119 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 KIAA1211Q6ZU35 1233 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 FAM126BQ8IXS8 530 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 SLC43A3Q8NBI5 491 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 MORC4Q8TE76 937 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 MYLIPQ8WY64 445 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 ESR2Q92731 530 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 RILPL2Q969X0 211 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 FAM227BQ96M60 508 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP46-208ENST00000512656 PPP1R12CQ9BZL4 782 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 TTYH1Q9H313 450 aaPredicted RBP8.42□□□□□ -1.06
USP46-208ENST00000512656 ETNK1Q9HBU6 452 aa8.42□□□□□ -1.06
USP46-208ENST00000512656 DNMT3AQ9Y6K1 912 aaPredicted RBP8.42□□□□□ -1.06
USP46-208ENST00000512656 ASTN1O14525 1302 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 WDR19Q8NEZ3 1342 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 RAD50Q92878 1312 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.41□□□□□ -1.06
USP46-208ENST00000512656 HIP1O00291 1037 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 ZNF213O14771 459 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP46-208ENST00000512656 CD4P01730 458 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 SUPT20HL2P0C7V6 817 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 CSF2RAP15509 400 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 CPT1AP50416 773 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 ALDH5A1P51649 535 aaPredicted RBP8.41□□□□□ -1.06
USP46-208ENST00000512656 HAND2P61296 217 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 DUSP28Q4G0W2 176 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 C4orf17Q53FE4 359 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 TMEM240Q5SV17 173 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 TTBK2Q6IQ55 1244 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 TAPT1Q6NXT6 567 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 RNF207Q6ZRF8 634 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 EEPD1Q7L9B9 569 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 IQCA1Q86XH1 822 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 DGKHQ86XP1 1220 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 FBXO16Q8IX29 292 aaPredicted RBP8.41□□□□□ -1.06
USP46-208ENST00000512656 RPUSD2Q8IZ73 545 aaKnown RBP8.41□□□□□ -1.06
USP46-208ENST00000512656 TIFAQ96CG3 184 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 WDR11Q9BZH6 1224 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 LNPKQ9C0E8 428 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 MAF1Q9H063 256 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 HIPK3Q9H422 1215 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 IL23AQ9NPF7 189 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 PDGFCQ9NRA1 345 aa8.41□□□□□ -1.06
USP46-208ENST00000512656 FRMPD2Q68DX3 1309 aaPredicted RBP8.4□□□□□ -1.06
USP46-208ENST00000512656 NFIBO00712 420 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 KPNA6O60684 536 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 FGBP02675 491 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 SNHG28P0DPA3 235 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 PDHBP11177 359 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 SDSP20132 328 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 CALML3P27482 149 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 CYP2C18P33260 490 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 ZNF543Q08ER8 600 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 TLR1Q15399 786 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 RAB30Q15771 203 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 RASIP1Q5U651 963 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 ZNF365Q70YC5 407 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 C16orf59Q7L2K0 433 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 RASGRP2Q7LDG7 609 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 ZNF589Q86UQ0 364 aaPredicted RBP8.4□□□□□ -1.06
USP46-208ENST00000512656 SMC5Q8IY18 1101 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 PLPP7Q8NBV4 271 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 DNERQ8NFT8 737 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 SCFD2Q8WU76 684 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms