RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 RABGGTAQ92696 567 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 ELMO3Q96BJ8 720 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 CALCOCO1Q9P1Z2 691 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
PRDM16-207ENST00000512462 DISP2A7MBM2 1401 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 RSPH10B2B2RC85 870 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 RSPH10BP0C881 870 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 SLFN12Q8IYM2 578 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
PRDM16-207ENST00000512462 ANKFY1Q9P2R3 1169 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 PALM3A6NDB9 673 aaPredicted RBP13.08□□□□□ -0.32
PRDM16-207ENST00000512462 PPP1R2P41236 205 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 SPP2Q13103 211 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 ZC2HC1CQ53FD0 456 aaPredicted RBP13.08□□□□□ -0.32
PRDM16-207ENST00000512462 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 TTLL6Q8N841 843 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 CCDC114Q96M63 670 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 SPZ1Q9BXG8 430 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 TSGA10Q9BZW7 698 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 THAP9Q9H5L6 903 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 SYNCQ9H7C4 482 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 STK17AQ9UEE5 414 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 RCAN1P53805 252 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 KCNH2Q12809 1159 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 GPATCH11Q8N954 259 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 ZMYND12Q9H0C1 365 aa13.08□□□□□ -0.32
PRDM16-207ENST00000512462 DHX36Q9H2U1 1008 aaKnown RBP13.08□□□□□ -0.32
PRDM16-207ENST00000512462 ITGB4P16144 1822 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
PRDM16-207ENST00000512462 GOLGA6CA6NDK9 693 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 GOLGA6DP0CG33 693 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 IL17AQ16552 155 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 IFI16Q16666 785 aaKnown RBP13.07□□□□□ -0.32
PRDM16-207ENST00000512462 CFAP221Q4G0U5 840 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 MS4A14Q96JA4 679 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 GOLGA6AQ9NYA3 693 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
PRDM16-207ENST00000512462 PSEN1P49768 467 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 VSNL1P62760 191 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 ADCY1Q08828 1119 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 WHAMMP3Q1A5X7 153 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
PRDM16-207ENST00000512462 LRRIQ4A6NIV6 560 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 TADA3O75528 432 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 PEX3P56589 373 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 OSTNP61366 133 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 MESDQ14696 234 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 SEPT14Q6ZU15 432 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 ZNF526Q8TF50 670 aaPredicted RBP13.06□□□□□ -0.32
PRDM16-207ENST00000512462 TEKT3Q9BXF9 490 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 GLT8D2Q9H1C3 349 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 CUEDC2Q9H467 287 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 EPB41L5Q9HCM4 733 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 ZBED4O75132 1171 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 ADRA2BP18089 450 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 TNNC1P63316 161 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 TRAF1Q13077 416 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 PDXDC2PQ6P474 469 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 ARHGAP27Q6ZUM4 889 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 CERS5Q8N5B7 392 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 FAM76AQ8TAV0 307 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 LACRTQ9GZZ8 138 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 LARSQ9P2J5 1176 aaKnown RBP13.06□□□□□ -0.32
PRDM16-207ENST00000512462 GOLGA6L10A0A0M3HER8 536 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 IGBP1P78318 339 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 LMBRD2Q68DH5 695 aaPredicted RBP13.06□□□□□ -0.32
PRDM16-207ENST00000512462 GJB7Q6PEY0 223 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 GSTA5Q7RTV2 222 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 ANKRD35Q8N283 1001 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 GLG1Q92896 1179 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
PRDM16-207ENST00000512462 DNAJC17Q9NVM6 304 aaKnown RBP13.06□□□□□ -0.32
PRDM16-207ENST00000512462 KRIT1O00522 736 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 HNRNPDLO14979 420 aaKnown RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 ZBTB39O15060 712 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 BUB1BO60566 1050 aaPredicted RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 KRT19P08727 400 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 BAG6P46379 1132 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 GCLMP48507 274 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 SMTNP53814 917 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 CC2D1AQ6P1N0 951 aaPredicted RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 AFAP1L1Q8TED9 768 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 NAP1L4Q99733 375 aaKnown RBP13.05□□□□□ -0.32
PRDM16-207ENST00000512462 PTPN22Q9Y2R2 807 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 MYBP10242 640 aa13.05□□□□□ -0.32
PRDM16-207ENST00000512462 SLC9A1P19634 815 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms