RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 IKBKEQ14164 716 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 PKN1Q16512 942 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 RTN1Q16799 776 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 MUM1L1Q5H9M0 696 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 MYOCDQ8IZQ8 938 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 FBXO18Q8NFZ0 1043 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 COPS5Q92905 334 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 IGFLR1Q9H665 355 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 SENP2Q9HC62 589 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 VTA1Q9NP79 307 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 IL17RBQ9NRM6 502 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
PDLIM5-217ENST00000512274 CFAP54Q96N23 3096 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 USP34Q70CQ2 3546 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 MICAL3Q7RTP6 2002 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 PRR23AA6NEV1 266 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 DEXIO95424 95 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 TSPY3P0CV98 308 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 TSPY8P0CW00 308 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 KIF5BP33176 963 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 GTF2F1P35269 517 aaKnown RBP eCLIP12□□□□□ -0.49
PDLIM5-217ENST00000512274 GNAQP50148 359 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 OAZ1P54368 228 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
PDLIM5-217ENST00000512274 RESTQ13127 1097 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 GDF6Q6KF10 455 aaPredicted RBP12□□□□□ -0.49
PDLIM5-217ENST00000512274 NSMFQ6X4W1 530 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 MICU3Q86XE3 530 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 CAGE1Q8TC20 777 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 DHX38Q92620 1227 aaKnown RBP12□□□□□ -0.49
PDLIM5-217ENST00000512274 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 IRF2BPLQ9H1B7 796 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 NYAP2Q9P242 653 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
PDLIM5-217ENST00000512274 CACNA1AO00555 2505 aa12□□□□□ -0.49
PDLIM5-217ENST00000512274 ZDBF2Q9HCK1 2354 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 TMEM232C9JQI7 657 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 LINC01565O15544 149 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 NMT2O60551 498 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 UPP2O95045 317 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 CXCL10P02778 98 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 CKBP12277 381 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 PTPN11Q06124 597 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 IKQ13123 557 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 COL19A1Q14993 1142 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 KLHL40Q2TBA0 621 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 BRDTQ58F21 947 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 RASGRP2Q7LDG7 609 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 BRAPQ7Z569 592 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 TMEM192Q8IY95 271 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 TRIM22Q8IYM9 498 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 CTAGE1Q96RT6 745 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 LMBRD1Q9NUN5 540 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 CYP39A1Q9NYL5 469 aa11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 MORC2Q9Y6X9 1032 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-217ENST00000512274 MED19A0JLT2 244 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 PRPF3O43395 683 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 TBX10O75333 385 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 MBD3O95983 291 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 SNHG28P0DPA3 235 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 HYAL1Q12794 435 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 SMAD4Q13485 552 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 GRM4Q14833 912 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 SAMD11Q96NU1 681 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 SCAND2PQ9GZW5 306 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 KAT14Q9H8E8 782 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 MTMR4Q9NYA4 1195 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 CD207Q9UJ71 328 aa11.98□□□□□ -0.49
PDLIM5-217ENST00000512274 RALGAPA2Q2PPJ7 1873 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 MYO7AQ13402 2215 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 VPS37CA5D8V6 355 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 H3BQV1 296 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 KPNA6O60684 536 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 EFCAB14O75071 495 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 PDGFBP01127 241 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 AMHP03971 560 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 BMP3P12645 472 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 ALDH5A1P51649 535 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 KRT85P78386 507 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 HTRA4P83105 476 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 SSRP1Q08945 709 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 SIGLEC14Q08ET2 396 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 CTC1Q2NKJ3 1217 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 SLFN13Q68D06 897 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 FBXO11Q86XK2 927 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 PNMA1Q8ND90 353 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 CTCFLQ8NI51 663 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 MORC4Q8TE76 937 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 MKL1Q969V6 931 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 C8orf76Q96K31 380 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms