RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SMIM10L2BP0DMW5 78 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 RLBP1P12271 317 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 NPR3P17342 541 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 TDO2P48775 406 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 KCNC3Q14003 757 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 DUSP6Q16828 381 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 RSPO4Q2I0M5 234 aaPredicted RBP10.75□□□□□ -0.69
NUP54-211ENST00000512151 CCDC105Q8IYK2 499 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 DCAF4Q8WV16 495 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 LINC01599Q8WXQ3 324 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 STX8Q9UNK0 236 aa10.75□□□□□ -0.69
NUP54-211ENST00000512151 M0R2C6 588 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 CHRNA1P02708 482 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 GHRP10912 638 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 GATMP50440 423 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 LAMC2Q13753 1193 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 HSDL1Q3SXM5 330 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 NAALADL2Q58DX5 795 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 FAM26DQ5JW98 314 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 ANKRD54Q6NXT1 300 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 CRIPAKQ8N1N5 446 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 CLASRPQ8N2M8 674 aaKnown RBP10.74□□□□□ -0.69
NUP54-211ENST00000512151 DTWD2Q8NBA8 298 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 FLCNQ8NFG4 579 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 SYTL5Q8TDW5 730 aaPredicted RBP10.74□□□□□ -0.69
NUP54-211ENST00000512151 NEK1Q96PY6 1258 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 MFSD1Q9H3U5 465 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 RNPEPQ9H4A4 650 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 ZNF287Q9HBT7 754 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
NUP54-211ENST00000512151 B4DLN1 442 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 GPAA1O43292 621 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 PPFIA3O75145 1194 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 CAND2O75155 1236 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 AOC1P19801 751 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 TECP42680 631 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 NOVP48745 357 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
NUP54-211ENST00000512151 ERVFC1P60507 584 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 LPIN1Q14693 890 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 PAN2Q504Q3 1202 aaKnown RBP10.73□□□□□ -0.69
NUP54-211ENST00000512151 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 IFNL3Q8IZI9 196 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
NUP54-211ENST00000512151 CYP2W1Q8TAV3 490 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 POMKQ9H5K3 350 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 BCAS3Q9H6U6 928 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 EHMT1Q9H9B1 1298 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 SETD4Q9NVD3 440 aa10.73□□□□□ -0.69
NUP54-211ENST00000512151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP54-211ENST00000512151 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 SP2Q02086 613 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 STXBP2Q15833 593 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 USH1GQ495M9 461 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 CELF3Q5SZQ8 465 aaKnown RBP10.72□□□□□ -0.69
NUP54-211ENST00000512151 ZSCAN25Q6NSZ9 544 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 TMEM184AQ6ZMB5 413 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 RTN4RL1Q86UN2 441 aaPredicted RBP10.72□□□□□ -0.69
NUP54-211ENST00000512151 CMTR2Q8IYT2 770 aaKnown RBP10.72□□□□□ -0.69
NUP54-211ENST00000512151 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 KIF1BPQ96EK5 621 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 SPATA33Q96N06 139 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 MRVI1Q9Y6F6 885 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
NUP54-211ENST00000512151 FSCN2O14926 492 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 APPP05067 770 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 EIF2AK2P19525 551 aaKnown RBP10.71□□□□□ -0.69
NUP54-211ENST00000512151 ADAM17P78536 824 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 PPARAQ07869 468 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 ZKSCAN2Q63HK3 967 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 LLGL2Q6P1M3 1020 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 RUFY4Q6ZNE9 571 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 ITPRIPQ8IWB1 547 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 MICAL1Q8TDZ2 1067 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 NSUN6Q8TEA1 469 aaKnown RBP10.71□□□□□ -0.69
NUP54-211ENST00000512151 APPBP2Q92624 585 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 GPKOWQ92917 476 aaPredicted RBP eCLIP10.71□□□□□ -0.691e-10■■■□□ 14.7
NUP54-211ENST00000512151 HCSTQ9UBK5 93 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 LIMD1Q9UGP4 676 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 RCAN3Q9UKA8 241 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 NR2E1Q9Y466 385 aa10.71□□□□□ -0.69
NUP54-211ENST00000512151 FASNP49327 2511 aaKnown RBP10.71□□□□□ -0.7
NUP54-211ENST00000512151 FAM208BQ5VWN6 2430 aa10.71□□□□□ -0.7
NUP54-211ENST00000512151 PATL2C9JE40 543 aaKnown RBP10.7□□□□□ -0.7
NUP54-211ENST00000512151 H3BRB1 525 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 GGPS1O95749 300 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 LGALS2P05162 132 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 WEE2P0C1S8 567 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
NUP54-211ENST00000512151 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 MGAT3Q09327 533 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 APOBRQ0VD83 1088 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 HSP90AB4PQ58FF6 505 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 FEZF2Q8TBJ5 459 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 RIN2Q8WYP3 895 aaPredicted RBP10.7□□□□□ -0.7
NUP54-211ENST00000512151 IWS1Q96ST2 819 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 RMDN3Q96TC7 470 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 CDCA3Q99618 268 aaPredicted RBP10.7□□□□□ -0.7
NUP54-211ENST00000512151 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
NUP54-211ENST00000512151 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms