RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
RNF4-216ENST00000511859 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
RNF4-216ENST00000511859 ASCL5Q7RTU5 278 aa13.48□□□□□ -0.25
RNF4-216ENST00000511859 VSIG10LQ86VR7 867 aa13.48□□□□□ -0.25
RNF4-216ENST00000511859 DGKHQ86XP1 1220 aa13.48□□□□□ -0.25
RNF4-216ENST00000511859 ADGRF4Q8IZF3 695 aa13.48□□□□□ -0.25
RNF4-216ENST00000511859 SAMD3Q8N6K7 520 aa13.48□□□□□ -0.25
RNF4-216ENST00000511859 EP300Q09472 2414 aaPredicted RBP13.48□□□□□ -0.25
RNF4-216ENST00000511859 PRR23AA6NEV1 266 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 CSPG5O95196 566 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 FGAP02671 866 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 CHRNA1P02708 482 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 LGALS2P05162 132 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 ITGB1P05556 798 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 DNAJB1P25685 340 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 ID4P47928 161 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 NRIP1P48552 1158 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 ADAM17P78536 824 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 GHRHRQ02643 423 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 VPS53Q5VIR6 699 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 ADGRD2Q7Z7M1 963 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 POF1BQ8WVV4 589 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 PDCD2LQ9BRP1 358 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 CPVLQ9H3G5 476 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 EHMT1Q9H9B1 1298 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
RNF4-216ENST00000511859 NOP56O00567 594 aaKnown RBP13.46□□□□□ -0.25
RNF4-216ENST00000511859 SORBS3O60504 671 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 UBA1P22314 1058 aaKnown RBP13.46□□□□□ -0.25
RNF4-216ENST00000511859 HSD17B4P51659 736 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 CCDC178Q5BJE1 867 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 MFSD6Q6ZSS7 791 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 RBM23Q86U06 439 aaKnown RBP13.46□□□□□ -0.25
RNF4-216ENST00000511859 CMTR2Q8IYT2 770 aaKnown RBP13.46□□□□□ -0.25
RNF4-216ENST00000511859 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 SUSD6Q92537 303 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 TLE6Q9H808 572 aa13.46□□□□□ -0.25
RNF4-216ENST00000511859 BARX2Q9UMQ3 279 aaPredicted RBP13.46□□□□□ -0.25
RNF4-216ENST00000511859 CCDC171Q6TFL3 1326 aa13.46□□□□□ -0.26
RNF4-216ENST00000511859 NRCAMQ92823 1304 aa13.46□□□□□ -0.26
RNF4-216ENST00000511859 KDM4AO75164 1064 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 GLP2RO95838 553 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 GHRP10912 638 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 NT5C2P49902 561 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 PGM5Q15124 567 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 ASPRV1Q53RT3 343 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 TAF2Q6P1X5 1199 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 RSPH3Q86UC2 560 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 KLHL23Q8NBE8 558 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 ZNF215Q9UL58 517 aaPredicted RBP13.45□□□□□ -0.26
RNF4-216ENST00000511859 ZNF292O60281 2723 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 DNAH14Q0VDD8 3507 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 ARHGAP4P98171 946 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 NEDD9Q14511 834 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 ZBTB33Q86T24 672 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 CRIPAKQ8N1N5 446 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
RNF4-216ENST00000511859 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
RNF4-216ENST00000511859 MRPL42Q9Y6G3 142 aaKnown RBP13.45□□□□□ -0.26
RNF4-216ENST00000511859 TPRP12270 2363 aaKnown RBP13.44□□□□□ -0.26
RNF4-216ENST00000511859 ZMYM6O95789 1325 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
RNF4-216ENST00000511859 CCND2P30279 289 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 UBE3AQ05086 875 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 LPIN1Q14693 890 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 GNPTABQ3T906 1256 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 METTL7BQ6UX53 244 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 UBALD2Q8IYN6 164 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 ESR2Q92731 530 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 NKD2Q969F2 451 aaPredicted RBP13.44□□□□□ -0.26
RNF4-216ENST00000511859 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 FTHL17Q9BXU8 183 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 RNF41Q9H4P4 317 aaPredicted RBP13.44□□□□□ -0.26
RNF4-216ENST00000511859 VAT1LQ9HCJ6 419 aa13.44□□□□□ -0.26
RNF4-216ENST00000511859 KIAA1671Q9BY89 1806 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 OPLAHO14841 1288 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 STAM2O75886 525 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 PDGFBP01127 241 aaPredicted RBP13.43□□□□□ -0.26
RNF4-216ENST00000511859 RPLP2P05387 115 aaKnown RBP13.43□□□□□ -0.26
RNF4-216ENST00000511859 STAG3L1P0CL83 205 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 SRGAP2BP0DMP2 458 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 MGAT3Q09327 533 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 PDE12Q6L8Q7 609 aaKnown RBP13.43□□□□□ -0.26
RNF4-216ENST00000511859 TMEM184AQ6ZMB5 413 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 TSHZ1Q6ZSZ6 1077 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 LMBR1Q8WVP7 490 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 GPR20Q99678 358 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 BCAS3Q9H6U6 928 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 KAT14Q9H8E8 782 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 SQORQ9Y6N5 450 aa13.43□□□□□ -0.26
RNF4-216ENST00000511859 DMXL1Q9Y485 3027 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms