RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 PCYT2Q99447 389 aa18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 SLC9A2Q9UBY0 812 aa18.38■□□□□ 0.53
PDLIM5-216ENST00000511767 LGR5O75473 907 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 SMIM10L2AP0DMW4 78 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 SMIM10L2BP0DMW5 78 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 ADAM17P78536 824 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 PTK7Q13308 1070 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 TRIM71Q2Q1W2 868 aaKnown RBP18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 TRIM50Q86XT4 487 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 BLIDQ8IZY5 108 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 HERVK_113Q902F9 699 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 RNPC3Q96LT9 517 aaKnown RBP18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 C22orf23Q9BZE7 217 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 JPH1Q9HDC5 661 aaPredicted RBP18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 SETD4Q9NVD3 440 aa18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 TRIP12Q14669 1992 aaPredicted RBP18.37■□□□□ 0.53
PDLIM5-216ENST00000511767 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 RBM25P49756 843 aaKnown RBP18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 RBL2Q08999 1139 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 DAGLBQ8NCG7 672 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 CAGE1Q8TC20 777 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 WNT8BQ93098 351 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 SDF4Q9BRK5 362 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 STK36Q9NRP7 1315 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 GJB4Q9NTQ9 266 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 KCNJ14Q9UNX9 436 aa18.36■□□□□ 0.53
PDLIM5-216ENST00000511767 DOCK5Q9H7D0 1870 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 C17orf102A2RUQ5 167 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 TREHO43280 583 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 CCNE2O96020 404 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 CKBP12277 381 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 RFC2P35250 354 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 ACTR2P61160 394 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 SMAD3P84022 425 aaKnown RBP18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 FAM109BQ6ICB4 259 aaPredicted RBP18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 PSRC1Q6PGN9 363 aaPredicted RBP18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 SERINC5Q86VE9 423 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 AFAP1L1Q8TED9 768 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 ATP6V0A1Q93050 837 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 LENG9Q96B70 501 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 UIMC1Q96RL1 719 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 CXXC1Q9P0U4 656 aaPredicted RBP18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
PDLIM5-216ENST00000511767 CYP3A7-CYP3A51PA0A087WV96 503 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 IGKV6D-21A0A0A0MT36 114 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 IPO5O00410 1097 aaKnown RBP18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 SELPP16109 830 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 CYP3A7P24462 503 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 PRR16Q569H4 304 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 TRAF7Q6Q0C0 670 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 ABHD15Q6UXT9 468 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 OTOP2Q7RTS6 562 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 PLPPR4Q7Z2D5 763 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 DEFB128Q7Z7B8 93 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 TBCKQ8TEA7 893 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 GLG1Q92896 1179 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 TBC1D22BQ9NU19 505 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 ERAP1Q9NZ08 941 aa18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 ZNF215Q9UL58 517 aaPredicted RBP18.34■□□□□ 0.53
PDLIM5-216ENST00000511767 NRCAMQ92823 1304 aa18.33■□□□□ 0.53
PDLIM5-216ENST00000511767 GNAT1P11488 350 aa18.33■□□□□ 0.52
PDLIM5-216ENST00000511767 STAT5BP51692 787 aa18.33■□□□□ 0.52
PDLIM5-216ENST00000511767 ST3GAL1Q11201 340 aa18.33■□□□□ 0.52
PDLIM5-216ENST00000511767 ZNF618Q5T7W0 954 aa18.33■□□□□ 0.52
PDLIM5-216ENST00000511767 CCDC155Q8N6L0 562 aa18.33■□□□□ 0.52
PDLIM5-216ENST00000511767 NSUN7Q8NE18 718 aaKnown RBP18.33■□□□□ 0.52
PDLIM5-216ENST00000511767 ZNF577Q9BSK1 485 aa18.33■□□□□ 0.52
PDLIM5-216ENST00000511767 GRXCR1A8MXD5 290 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 PFKMP08237 780 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 Q7L0L9 218 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 LRRC8DQ7L1W4 858 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 OXER1Q8TDS5 423 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 WASF1Q92558 559 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 MBOAT7Q96N66 472 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 TET1Q8NFU7 2136 aa18.32■□□□□ 0.52
PDLIM5-216ENST00000511767 EMSYQ7Z589 1322 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 DDX39AO00148 427 aaKnown RBP18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 MSH4O15457 936 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 NBNO60934 754 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 PARNO95453 639 aaKnown RBP18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 CXCL10P02778 98 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 INSRRP14616 1297 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 XBP1P17861 261 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 SETQ01105 290 aaPredicted RBP18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 MBTPS1Q14703 1052 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 PLCB4Q15147 1175 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 Q4G0T1 1027 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 MARCH8Q5T0T0 291 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 DEFB123Q8N688 67 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 MTMR10Q9NXD2 777 aa18.31■□□□□ 0.52
PDLIM5-216ENST00000511767 JAK2O60674 1132 aa18.3■□□□□ 0.52
PDLIM5-216ENST00000511767 MARK3P27448 753 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms