RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 BUD31P41223 144 aaPredicted RBP4.7□□□□□ -1.66
CHD1-207ENST00000511628 GABREP78334 506 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 PAN2Q504Q3 1202 aaKnown RBP4.7□□□□□ -1.66
CHD1-207ENST00000511628 FAM47CQ5HY64 1035 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 FAM26FQ5R3K3 315 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 PRRT2Q7Z6L0 340 aaPredicted RBP4.7□□□□□ -1.66
CHD1-207ENST00000511628 TXNDC5Q8NBS9 432 aaKnown RBP4.7□□□□□ -1.66
CHD1-207ENST00000511628 FBXW5Q969U6 566 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 DHRS4Q9BTZ2 278 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 JADE2Q9NQC1 790 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 NDOR1Q9UHB4 597 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 TMA7Q9Y2S6 64 aaKnown RBP4.7□□□□□ -1.66
CHD1-207ENST00000511628 PCDHA8Q9Y5H6 950 aa4.7□□□□□ -1.66
CHD1-207ENST00000511628 NKRFO15226 690 aaKnown RBP eCLIP4.69□□□□□ -1.66
CHD1-207ENST00000511628 PRICKLE3O43900 615 aaPredicted RBP4.69□□□□□ -1.66
CHD1-207ENST00000511628 LRG1P02750 347 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 LTFP02788 710 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 ENO2P09104 434 aaPredicted RBP4.69□□□□□ -1.66
CHD1-207ENST00000511628 KRT15P19012 456 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 GLRBP48167 497 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 DNM2P50570 870 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 ADAM9Q13443 819 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 CRY1Q16526 586 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 ZC3H12BQ5HYM0 836 aaKnown RBP4.69□□□□□ -1.66
CHD1-207ENST00000511628 KCTD1Q719H9 257 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 LRP10Q7Z4F1 713 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 PLEKHH3Q7Z736 793 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 NLGN4XQ8N0W4 816 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 TTLL11Q8NHH1 800 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 WDR48Q8TAF3 677 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 UHMK1Q8TAS1 419 aaKnown RBP4.69□□□□□ -1.66
CHD1-207ENST00000511628 CLEC4DQ8WXI8 215 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 BARX1Q9HBU1 254 aaPredicted RBP4.69□□□□□ -1.66
CHD1-207ENST00000511628 RIC8BQ9NVN3 520 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 ZDHHC9Q9Y397 364 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 ASXL2Q76L83 1435 aa4.69□□□□□ -1.66
CHD1-207ENST00000511628 ADCY3O60266 1144 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 FAHP16930 419 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 SQSTM1Q13501 440 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 LONRF2Q1L5Z9 754 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 ZFYVE27Q5T4F4 411 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 BTBD8Q5XKL5 378 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 EGFLAMQ63HQ2 1017 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 GLB1LQ6UWU2 654 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 ARHGAP36Q6ZRI8 547 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 SH3TC2Q8TF17 1288 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 MAGEB10Q96LZ2 347 aaPredicted RBP4.68□□□□□ -1.66
CHD1-207ENST00000511628 CD244Q9BZW8 370 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 CDIP1Q9H305 208 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 DLL4Q9NR61 685 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 ARHGAP20Q9P2F6 1191 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 ARHGAP28Q9P2N2 729 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 RBPJLQ9UBG7 517 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 MRPS23Q9Y3D9 190 aaKnown RBP4.68□□□□□ -1.66
CHD1-207ENST00000511628 PCDHA9Q9Y5H5 950 aa4.68□□□□□ -1.66
CHD1-207ENST00000511628 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 EFCAB14O75071 495 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 CKMP06732 381 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 SURF1Q15526 300 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 GPR19Q15760 415 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 ZNF827Q17R98 1081 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 SKIDA1Q1XH10 827 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 PHF19Q5T6S3 580 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 FOXB2Q5VYV0 432 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 ZSWIM2Q8NEG5 633 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 INVSQ9Y283 1065 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 ATP23Q9Y6H3 246 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 DUSP10Q9Y6W6 482 aa4.67□□□□□ -1.66
CHD1-207ENST00000511628 ESYT3A0FGR9 886 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 PRAMEF25A6NGN4 478 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 CRTAMO95727 393 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 PYGMP11217 842 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 PDE6AP16499 860 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 ZNF28P17035 718 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 MLLT6P55198 1093 aaPredicted RBP4.66□□□□□ -1.66
CHD1-207ENST00000511628 PFKPQ01813 784 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 SMAD2Q15796 467 aaKnown RBP4.66□□□□□ -1.66
CHD1-207ENST00000511628 SKOR2Q2VWA4 1001 aaPredicted RBP4.66□□□□□ -1.66
CHD1-207ENST00000511628 ZNF568Q3ZCX4 644 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 SPATS1Q496A3 300 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 C16orf59Q7L2K0 433 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 OSTM1Q86WC4 334 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 PTRH1Q86Y79 214 aaKnown RBP4.66□□□□□ -1.66
CHD1-207ENST00000511628 CHST13Q8NET6 341 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 BORCS6Q96GS4 357 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 LOXL4Q96JB6 756 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 EXOC2Q96KP1 924 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 SFMBT1Q9UHJ3 866 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 ZFP69BQ9UJL9 534 aa4.66□□□□□ -1.66
CHD1-207ENST00000511628 SBNO2Q9Y2G9 1366 aa4.65□□□□□ -1.66
CHD1-207ENST00000511628 CCDC66A2RUB6 948 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 ENPP3O14638 875 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 GJA4P35212 333 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 C2orf27AQ580R0 203 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 PRR31Q5SQ13 230 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 CD276Q5ZPR3 534 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 DPP8Q6V1X1 898 aaPredicted RBP4.65□□□□□ -1.67
CHD1-207ENST00000511628 ARHGEF18Q6ZSZ5 1173 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 KBTBD2Q8IY47 623 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 IFNL2Q8IZJ0 200 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms