RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PSMC2P35998 433 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 CCDC121Q6ZUS5 278 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 CATSPER1Q8NEC5 780 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 CXorf38Q8TB03 319 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 RSRC1Q96IZ7 334 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ACCSQ96QU6 501 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 PLEKHF1Q96S99 279 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 PARVGQ9HBI0 331 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 RRN3Q9NYV6 651 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 OGFRQ9NZT2 677 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 TRIM35Q9UPQ4 493 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 RBM47A0AV96 593 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 TRAF5O00463 557 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 TGFB3P10600 412 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 IRX1P78414 480 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PPARAQ07869 468 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 POLA2Q14181 598 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 EMBQ6PCB8 327 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 TTLL6Q8N841 843 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 GRAMD1AQ96CP6 724 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 FOPNLQ96NB1 174 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ZBTB3Q9H5J0 574 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PCDHA4Q9UN74 947 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PPEF1O14829 653 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 IL18RAPO95256 599 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 TROVE2P10155 538 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 KPNA1P52294 538 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 OAZ1P54368 228 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 INHBEP58166 350 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ZBTB16Q05516 673 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 SLFNL1Q499Z3 407 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ANO6Q4KMQ2 910 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 SBK1Q52WX2 424 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 DCUN1D2Q6PH85 259 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 USP17L2Q6R6M4 530 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 EFL1Q7Z2Z2 1120 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 RAB44Q7Z6P3 723 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PNMA8AQ86V59 439 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MAP4K1Q92918 833 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 RBM41Q96IZ5 413 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 KIAA1257Q9ULG3 409 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 TRIM33Q9UPN9 1127 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 KCNH4Q9UQ05 1017 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 CHMP2BQ9UQN3 213 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PSME4Q14997 1843 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 RNF40O75150 1001 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ADAMTS2O95450 1211 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 HSPD1P10809 573 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ZNF131P52739 623 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 RPS6KA1Q15418 735 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MAN2A1Q16706 1144 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 STRIP1Q5VSL9 837 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 CCDC186Q7Z3E2 898 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ARHGAP18Q8N392 663 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 C3orf20Q8ND61 904 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 SYN2Q92777 582 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MS4A14Q96JA4 679 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MTMR12Q9C0I1 747 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ZSWIM4Q9H7M6 989 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 DDX56Q9NY93 547 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 LRWD1Q9UFC0 647 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 AP3M1Q9Y2T2 418 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ARFGEF1Q9Y6D6 1849 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PVALEFA0A1B0GWK0 134 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 H2AFYO75367 372 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 URI1O94763 535 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 STMN1P16949 149 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 RECQLP46063 649 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 CUL4AQ13619 759 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 CAMK4Q16566 473 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 STAG2Q8N3U4 1231 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 COA7Q96BR5 231 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 UBA5Q9GZZ9 404 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 CCDC68Q9H2F9 335 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PRKAG2Q9UGJ0 569 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MCM3APO60318 1980 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 BCORQ6W2J9 1755 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MST1RQ04912 1400 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 RRN3P2A6NIE6 340 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 H2AFZP0C0S5 128 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MARCKSP29966 332 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ETFBP38117 255 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 FKBP1BP68106 108 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 TFCP2Q12800 502 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 PHLDB3Q6NSJ2 640 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 C8orf74Q6P047 294 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 H2AFVQ71UI9 128 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ELMOD1Q8N336 334 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 ATP6V0A4Q9HBG4 840 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 LRRIQ3A6PVS8 624 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 SLC16A3O15427 465 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MAPTP10636 758 aaKnown RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 SLC1A1P43005 524 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 SLC39A14Q15043 492 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 NKX1-1Q15270 411 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-209ENST00000511467 MSL1Q68DK7 614 aa5.35□□□□□ -1.55
PTPN13-209ENST00000511467 SARM1Q6SZW1 724 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms