RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	UTP14C	Q5TAP6	766 aa	Known RBP	13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	ATP6V0A1	Q93050	837 aa		13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	CDHR1	Q96JP9	859 aa		13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	MXRA8	Q9BRK3	442 aa		13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	ZSWIM6	Q9HCJ5	1215 aa		13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	PRDM6	Q9NQX0	595 aa		13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	PKD2L1	Q9P0L9	805 aa		13.79	□□□□□ -0.2
CHFR-208	ENST00000511001	MUC3A	Q02505	3323 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	CCDC196	A0A1B0GTZ2	297 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	ESYT2	A0FGR8	921 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	MAFG	O15525	162 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	PARN	O95453	639 aa	Known RBP	13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	FOS	P01100	380 aa	Predicted RBP	13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	AR	P10275	920 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	FOSL2	P15408	326 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	PDIA3	P30101	505 aa	Known RBP	13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	TCF7	P36402	384 aa	Predicted RBP	13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	SREBF1	P36956	1147 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	ERICH6B	Q5W0A0	696 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	RUFY3	Q7L099	469 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	SEPT1	Q8WYJ6	367 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	PHKB	Q93100	1093 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	SLC9A7	Q96T83	725 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	EHMT1	Q9H9B1	1298 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	SETD4	Q9NVD3	440 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	PCDHA11	Q9Y5I1	949 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	EVPL	Q92817	2033 aa		13.78	□□□□□ -0.2
CHFR-208	ENST00000511001	PPFIA3	O75145	1194 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	BAIAP3	O94812	1187 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	AP3B2	Q13367	1082 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	JAKMIP3	Q5VZ66	844 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	CNKSR3	Q6P9H4	555 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	PHOSPHO2	Q8TCD6	241 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	CRYGN	Q8WXF5	182 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	PCYT2	Q99447	389 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	OSBPL7	Q9BZF2	842 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	TM6SF1	Q9BZW5	370 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	ZMYND12	Q9H0C1	365 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	GLT8D2	Q9H1C3	349 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	PRDM12	Q9H4Q4	367 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	NCOA5	Q9HCD5	579 aa	Known RBP	13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	KCNH7	Q9NS40	1196 aa		13.77	□□□□□ -0.21
CHFR-208	ENST00000511001	NFASC	O94856	1347 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	MEIS1	O00470	390 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	LGR5	O75473	907 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	ARHGEF15	O94989	841 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	IFNAR1	P17181	557 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	THPO	P40225	353 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	WDR5	P61964	334 aa	Known RBP	13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	CCT2	P78371	535 aa	Known RBP	13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	ARHGAP4	P98171	946 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	ITGB3BP	Q13352	177 aa	Predicted RBP	13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	MKRN4P	Q13434	485 aa	Predicted RBP	13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	ADGRE1	Q14246	886 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	CEP55	Q53EZ4	464 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	LMBR1	Q8WVP7	490 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	RNF26	Q9BY78	433 aa	Predicted RBP	13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	SLC28A3	Q9HAS3	691 aa		13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	ZNF215	Q9UL58	517 aa	Predicted RBP	13.76	□□□□□ -0.21
CHFR-208	ENST00000511001	EMSY	Q7Z589	1322 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	CYP3A4	P08684	503 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	DEFB103A	P81534	67 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	HERC6	Q8IVU3	1022 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	USP38	Q8NB14	1042 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	LARP6	Q9BRS8	491 aa	Known RBP	13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	SLC26A6	Q9BXS9	759 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	UPF3B	Q9BZI7	483 aa	Known RBP	13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	AGO4	Q9HCK5	861 aa	Known RBP	13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	JPH1	Q9HDC5	661 aa	Predicted RBP	13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	SLC9A2	Q9UBY0	812 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	CYP46A1	Q9Y6A2	500 aa		13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.75	□□□□□ -0.21
CHFR-208	ENST00000511001	NRCAM	Q92823	1304 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	IGLV3-22	A0A075B6J6	115 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	RSPH10B2	B2RC85	870 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	FAM86B1	E9PN63	330 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	EDIL3	O43854	480 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	CA3	P07451	260 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	FAM86B2	P0C5J1	330 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	RSPH10B	P0C881	870 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	GNAT1	P11488	350 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	MARK3	P27448	753 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	PPP2R2D	Q66LE6	453 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	NIPA1	Q7RTP0	329 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	DBF4B	Q8NFT6	615 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	SMARCAD1	Q9H4L7	1026 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	C6orf50	Q9HD87	102 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	ERAP1	Q9NZ08	941 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	COL4A4	P53420	1690 aa	Predicted RBP	13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	NCOR1	O75376	2440 aa		13.74	□□□□□ -0.21
CHFR-208	ENST00000511001	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.73	□□□□□ -0.21
CHFR-208	ENST00000511001	CAND2	O75155	1236 aa		13.73	□□□□□ -0.21
CHFR-208	ENST00000511001	ATG7	O95352	703 aa		13.73	□□□□□ -0.21
CHFR-208	ENST00000511001	CCNE2	O96020	404 aa		13.73	□□□□□ -0.21
CHFR-208	ENST00000511001	CTSH	P09668	335 aa		13.73	□□□□□ -0.21
CHFR-208	ENST00000511001	KCNJ6	P48051	423 aa		13.73	□□□□□ -0.21

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