RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 GPRASP2Q96D09 838 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 ALG1Q9BT22 464 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 VEZTQ9HBM0 779 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 HELLSQ9NRZ9 838 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 QPCTLQ9NXS2 382 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 ZNF532Q9HCE3 1301 aa10.76□□□□□ -0.69
USP53-207ENST00000510852 YBX3P16989 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP53-207ENST00000510852 MZF1P28698 734 aaPredicted RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 PDE6CP51160 858 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 KIF11P52732 1056 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 PDE4BQ07343 736 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 RASA2Q15283 850 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 GRIK5Q16478 980 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 TTC31Q49AM3 519 aaPredicted RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 MCMDC2Q4G0Z9 681 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 VWA3BQ502W6 1294 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 ARHGAP27Q6ZUM4 889 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 MYLK4Q86YV6 388 aaPredicted RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 NKAPQ8N5F7 415 aaKnown RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 PLPP7Q8NBV4 271 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 OSBP2Q969R2 916 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 CAPS2Q9BXY5 557 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 SCHIP1Q9P0W5 487 aaPredicted RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 ZFATQ9P243 1243 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 EPS15L1Q9UBC2 864 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 RAD50Q92878 1312 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 FER1L6Q2WGJ9 1857 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 GNAT2P19087 354 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 ATP6V1E1P36543 226 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 MAPK9P45984 424 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 PRELPP51888 382 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 TPD52P55327 224 aaPredicted RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 TRDNQ13061 729 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 PRKG2Q13237 762 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 C6orf118Q5T5N4 469 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 STRIP1Q5VSL9 837 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 ZNF589Q86UQ0 364 aaPredicted RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 NLRP14Q86W24 1093 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 NIM1KQ8IY84 436 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 ZNF384Q8TF68 577 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 NSUN4Q96CB9 384 aaKnown RBP10.75□□□□□ -0.69
USP53-207ENST00000510852 DESI2Q9BSY9 194 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 MXD3Q9BW11 206 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 NLRC4Q9NPP4 1024 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 COL4A5P29400 1685 aa10.75□□□□□ -0.69
USP53-207ENST00000510852 ARFGEF1Q9Y6D6 1849 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 USP17L5A8MUK1 530 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 M0R2C6 588 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 CLASP2O75122 1294 aaKnown RBP10.74□□□□□ -0.69
USP53-207ENST00000510852 REC8O95072 547 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 SFTPCP11686 197 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 CYP7A1P22680 504 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 NAA16Q6N069 864 aaPredicted RBP10.74□□□□□ -0.69
USP53-207ENST00000510852 CERS5Q8N5B7 392 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 SUN5Q8TC36 379 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 SPATA18Q8TC71 538 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 TNPO1Q92973 898 aaKnown RBP10.74□□□□□ -0.69
USP53-207ENST00000510852 PUS7LQ9H0K6 701 aaKnown RBP10.74□□□□□ -0.69
USP53-207ENST00000510852 ZNRF3Q9ULT6 936 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 TMEM98Q9Y2Y6 226 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 MAST3O60307 1309 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 FAM155AB1AL88 458 aaPredicted RBP10.74□□□□□ -0.69
USP53-207ENST00000510852 ZNF24P17028 368 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 MXI1P50539 228 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 RAC1P63000 192 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 MTMR1Q13613 665 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 ATP13A4Q4VNC1 1196 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 NCAPG2Q86XI2 1143 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
USP53-207ENST00000510852 ANKMY2Q8IV38 441 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 TEX11Q8IYF3 940 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 SPIRE2Q8WWL2 714 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 RABGGTAQ92696 567 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 HPS3Q969F9 1004 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 RBCK1Q9BYM8 510 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 TCF7L2Q9NQB0 619 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 INCENPQ9NQS7 918 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 CHD4Q14839 1912 aa10.74□□□□□ -0.69
USP53-207ENST00000510852 MYH13Q9UKX3 1938 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 M0QX08 132 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 DESP17661 470 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 DGKGP49619 791 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 POLR2FP61218 127 aaKnown RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 DSC3Q14574 896 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 SWI5Q1ZZU3 235 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 ADGRA1Q86SQ6 560 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 UPF2Q9HAU5 1272 aaKnown RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 ZNF180Q9UJW8 692 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 DOCK2Q92608 1830 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 SERTM1A2A2V5 107 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 TTLL13PA6NNM8 815 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 FOXD2O60548 495 aaPredicted RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 RAD17O75943 681 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 CD4P01730 458 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 INPP5BP32019 993 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 SKIV2L2P42285 1042 aaKnown RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 FKBP1AP62942 108 aaKnown RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 DPYDQ12882 1025 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms