RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 LRWD1Q9UFC0 647 aa9.74□□□□□ -0.85
NFKB1-209ENST00000510638 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
NFKB1-209ENST00000510638 SAMM50Q9Y512 469 aa9.74□□□□□ -0.85
NFKB1-209ENST00000510638 PTCH2Q9Y6C5 1203 aa9.74□□□□□ -0.85
NFKB1-209ENST00000510638 ZNF236Q9UL36 1845 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 RBM47A0AV96 593 aaKnown RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 WDR64B1ANS9 1081 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 SLC26A4O43511 780 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CHMP2AO43633 222 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 GGPS1O95749 300 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 GH1P01241 217 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 AKR1A1P14550 325 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 ELNP15502 786 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 KCNA2P16389 499 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 UBA1P22314 1058 aaKnown RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CMA1P23946 247 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CNGA1P29973 690 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 GRK4P32298 578 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 ADCYAP1R1P41586 468 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 TNFAIP2Q03169 654 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 LAMC2Q13753 1193 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 DUSP28Q4G0W2 176 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 TPRNQ4KMQ1 711 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 BRDTQ58F21 947 aaPredicted RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 PRAMEF19Q5SWL8 479 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CELF3Q5SZQ8 465 aaKnown RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 NCAPH2Q6IBW4 605 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 ZNF746Q6NUN9 644 aaPredicted RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 TAPT1Q6NXT6 567 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 MIS18BP1Q6P0N0 1132 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CCDC62Q6P9F0 684 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 METTL7BQ6UX53 244 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 Q7L0L9 218 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CYFIP1Q7L576 1253 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 MIER3Q7Z3K6 550 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 DHX37Q8IY37 1157 aaKnown RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 SMAP1Q8IYB5 467 aaPredicted RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 IGSF22Q8N9C0 903 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 FSIP1Q8NA03 581 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 MRPS27Q92552 414 aaKnown RBP9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CALML4Q96GE6 196 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CCDC34Q96HJ3 373 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 UIMC1Q96RL1 719 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 KATNBL1Q9H079 304 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CSRNP2Q9H175 543 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 SPC25Q9HBM1 224 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 PDGFCQ9NRA1 345 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 MUC3AQ02505 3323 aa9.73□□□□□ -0.85
NFKB1-209ENST00000510638 LAMA2P24043 3122 aaKnown RBP9.72□□□□□ -0.85
NFKB1-209ENST00000510638 CACNA1AO00555 2505 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 POTEMA6NI47 508 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 DHX15O43143 795 aaKnown RBP9.72□□□□□ -0.85
NFKB1-209ENST00000510638 DKC1O60832 514 aaKnown RBP eCLIP9.72□□□□□ -0.85
NFKB1-209ENST00000510638 ATP9AO75110 1047 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 MBD3O95983 291 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 IGHA2P01877 340 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 PSAPP07602 524 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 ZNF865P0CJ78 1059 aaPredicted RBP9.72□□□□□ -0.85
NFKB1-209ENST00000510638 CYBAP13498 195 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
NFKB1-209ENST00000510638 CAP1Q01518 475 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 SP4Q02446 784 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 ITGB3BPQ13352 177 aaPredicted RBP9.72□□□□□ -0.85
NFKB1-209ENST00000510638 IL17AQ16552 155 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 LY6KQ17RY6 165 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 AXDND1Q5T1B0 1012 aaPredicted RBP9.72□□□□□ -0.85
NFKB1-209ENST00000510638 RESP18Q5W5W9 173 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 SNX29Q8TEQ0 813 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 GJA10Q969M2 543 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 SPATA33Q96N06 139 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 CLIC6Q96NY7 704 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 NT5C3AQ9H0P0 336 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 AP5M1Q9H0R1 490 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 UNC45AQ9H3U1 944 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 DISC1Q9NRI5 854 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 VAV3Q9UKW4 847 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 PCDHA10Q9Y5I2 948 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 PRUNE2Q8WUY3 3088 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 KDM3AQ9Y4C1 1321 aa9.72□□□□□ -0.85
NFKB1-209ENST00000510638 BDP1A6H8Y1 2624 aa9.71□□□□□ -0.85
NFKB1-209ENST00000510638 BACH1O14867 736 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 SEPT4O43236 478 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 EVI5O60447 810 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 MSCO60682 206 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 FARP2O94887 1054 aaPredicted RBP9.71□□□□□ -0.86
NFKB1-209ENST00000510638 ARIH2O95376 493 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 INHAP05111 366 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 RARBP10826 455 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 SMPD1P17405 629 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 MUTP22033 750 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 CCT6AP40227 531 aaKnown RBP9.71□□□□□ -0.86
NFKB1-209ENST00000510638 ACTR2P61160 394 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 SP2Q02086 613 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 CACNB2Q08289 660 aaPredicted RBP9.71□□□□□ -0.86
NFKB1-209ENST00000510638 SPIRE1Q08AE8 756 aa9.71□□□□□ -0.86
NFKB1-209ENST00000510638 EPHA7Q15375 998 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms