RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 NBNO60934 754 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 BAIAP3O94812 1187 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 CXCL10P02778 98 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 ACTN1P12814 892 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 SCG2P13521 617 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 EVCP57679 992 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 AP3B2Q13367 1082 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 TOB2Q14106 344 aaPredicted RBP11.77□□□□□ -0.53
PFDN1-203ENST00000510217 MBTPS1Q14703 1052 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 PKN1Q16512 942 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 TCTN1Q2MV58 587 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 GIMAP8Q8ND71 665 aaPredicted RBP11.77□□□□□ -0.53
PFDN1-203ENST00000510217 SLC17A8Q8NDX2 589 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 MAFAQ8NHW3 353 aaPredicted RBP11.77□□□□□ -0.53
PFDN1-203ENST00000510217 SLC9A7Q96T83 725 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 FTOQ9C0B1 505 aaKnown RBP eCLIP11.77□□□□□ -0.53
PFDN1-203ENST00000510217 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 MSRAQ9UJ68 235 aa11.77□□□□□ -0.53
PFDN1-203ENST00000510217 ZNF215Q9UL58 517 aaPredicted RBP11.77□□□□□ -0.53
PFDN1-203ENST00000510217 ESYT2A0FGR8 921 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 ADAMTS3O15072 1205 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 TREHO43280 583 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 EIF5BO60841 1220 aaKnown RBP11.76□□□□□ -0.53
PFDN1-203ENST00000510217 PARNO95453 639 aaKnown RBP11.76□□□□□ -0.53
PFDN1-203ENST00000510217 FOSP01100 380 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-203ENST00000510217 MYOGP15173 224 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 TCF7P36402 384 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-203ENST00000510217 SREBF1P36956 1147 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 ADAM17P78536 824 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 NTRK3Q16288 839 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 UTP14CQ5TAP6 766 aaKnown RBP11.76□□□□□ -0.53
PFDN1-203ENST00000510217 CNKSR3Q6P9H4 555 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 RUFY3Q7L099 469 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 CYP2W1Q8TAV3 490 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 ATP6V0A1Q93050 837 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 PHKBQ93100 1093 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 MXRA8Q9BRK3 442 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 CHD7Q9P2D1 2997 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 PCDHA11Q9Y5I1 949 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 UNC80Q8N2C7 3258 aa11.76□□□□□ -0.53
PFDN1-203ENST00000510217 GSTTP1A0A1W2PQM5 241 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 MAFGO15525 162 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
PFDN1-203ENST00000510217 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 SEC24BO95487 1268 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
PFDN1-203ENST00000510217 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
PFDN1-203ENST00000510217 CEP55Q53EZ4 464 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 PPP2R2DQ66LE6 453 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 LMBR1Q8WVP7 490 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 CRYGNQ8WXF5 182 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 RNF26Q9BY78 433 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-203ENST00000510217 ZMYND12Q9H0C1 365 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 GLT8D2Q9H1C3 349 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
PFDN1-203ENST00000510217 JPH1Q9HDC5 661 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-203ENST00000510217 KCNH7Q9NS40 1196 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 SETD4Q9NVD3 440 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 EMSYQ7Z589 1322 aa11.75□□□□□ -0.53
PFDN1-203ENST00000510217 CAND2O75155 1236 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 CA3P07451 260 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 ARP10275 920 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 IFNAR1P17181 557 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 MARK3P27448 753 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 THPOP40225 353 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
PFDN1-203ENST00000510217 DEFB103AP81534 67 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 ARHGAP4P98171 946 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
PFDN1-203ENST00000510217 NFKBIBQ15653 356 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 JAKMIP3Q5VZ66 844 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 HERC6Q8IVU3 1022 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 PHOSPHO2Q8TCD6 241 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 SEPT1Q8WYJ6 367 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 PCYT2Q99447 389 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 UPF3BQ9BZI7 483 aaKnown RBP11.74□□□□□ -0.53
PFDN1-203ENST00000510217 TM6SF1Q9BZW5 370 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 SLC28A3Q9HAS3 691 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 AGO4Q9HCK5 861 aaKnown RBP11.74□□□□□ -0.53
PFDN1-203ENST00000510217 SLC9A2Q9UBY0 812 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 NFASCO94856 1347 aa11.74□□□□□ -0.53
PFDN1-203ENST00000510217 IGLV3-22A0A075B6J6 115 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 FAM86B1E9PN63 330 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 MEIS1O00470 390 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 LGR5O75473 907 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 CTSHP09668 335 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 FAM86B2P0C5J1 330 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 GNAT1P11488 350 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 KCNJ6P48051 423 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 ADGRE1Q14246 886 aa11.73□□□□□ -0.53
PFDN1-203ENST00000510217 RUFY4Q6ZNE9 571 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms