RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	SPECC1	Q5M775	1068 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	TMEM63B	Q5T3F8	832 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	KRT79	Q5XKE5	535 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	HAUS3	Q68CZ6	603 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	MIER3	Q7Z3K6	550 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	MRPS27	Q92552	414 aa	Known RBP	13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	SYMPK	Q92797	1274 aa	Known RBP	13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	COPS5	Q92905	334 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	EMID1	Q96A84	441 aa	Predicted RBP	13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	EPSTI1	Q96J88	318 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	BCAS3	Q9H6U6	928 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	FAM13B	Q9NYF5	915 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	GNE	Q9Y223	722 aa	Known RBP	13.45	□□□□□ -0.26
RACK1-223	ENST00000510199		Q9Y3F1	56 aa		13.45	□□□□□ -0.26
RACK1-223	ENST00000510199	PP2D1	A8MPX8	630 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	SEPT4	O43236	478 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	ADCY6	O43306	1168 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	ATG7	O95352	703 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	CCNE2	O96020	404 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	INHA	P05111	366 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	CDC25A	P30304	524 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	ACTR2	P61160	394 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	ARHGAP1	Q07960	439 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	NFKBIB	Q15653	356 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	PKN2	Q16513	984 aa	Known RBP	13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	USP49	Q70CQ1	688 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	CABP7	Q86V35	215 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	FSIP1	Q8NA03	581 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	NEK9	Q8TD19	979 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	MMTAG2	Q9BU76	263 aa	Known RBP	13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	DISC1	Q9NRI5	854 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	SAMM50	Q9Y512	469 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	PCDHA10	Q9Y5I2	948 aa		13.44	□□□□□ -0.26
RACK1-223	ENST00000510199	KDM3A	Q9Y4C1	1321 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199		A0A1B0GVL5	298 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	SORBS3	O60504	671 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	DUSP11	O75319	330 aa	Known RBP	13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	PSAP	P07602	524 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	PFKFB1	P16118	471 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	MUT	P22033	750 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	RPA1	P27694	616 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	CNGA1	P29973	690 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	CCND3	P30281	292 aa	Predicted RBP	13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	HSDL1	Q3SXM5	330 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	TPRN	Q4KMQ1	711 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	HYI	Q5T013	277 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	GJC2	Q5T442	439 aa	Predicted RBP	13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	MIS18BP1	Q6P0N0	1132 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	ABHD15	Q6UXT9	468 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	CCDC73	Q6ZRK6	1079 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	OR6J1	Q8NGC5	347 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	SNX29	Q8TEQ0	813 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	SEPT1	Q8WYJ6	367 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	EVPL	Q92817	2033 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	CALML4	Q96GE6	196 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	SPATA33	Q96N06	139 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	HSD17B14	Q9BPX1	270 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	TUFT1	Q9NNX1	390 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	CCDC39	Q9UFE4	941 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	HPSE	Q9Y251	543 aa		13.43	□□□□□ -0.26
RACK1-223	ENST00000510199	TRIP12	Q14669	1992 aa	Predicted RBP	13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	GSTTP1	A0A1W2PQM5	241 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	NOP56	O00567	594 aa	Known RBP	13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	P4HB	P07237	508 aa	Known RBP	13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	SUPT20HL2	P0C7V6	817 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	CCT6A	P40227	531 aa	Known RBP	13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	SP4	Q02446	784 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	TLK2	Q86UE8	772 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	CATSPER3	Q86XQ3	398 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	KCTD17	Q8N5Z5	321 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	PPTC7	Q8NI37	304 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	GPR20	Q99678	358 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	PYM1	Q9BRP8	204 aa	Known RBP	13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	NT5C3A	Q9H0P0	336 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	AP5M1	Q9H0R1	490 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	GOLPH3L	Q9H4A5	285 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	HMX1	Q9NP08	348 aa	Predicted RBP	13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	KCNH3	Q9ULD8	1083 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	TELO2	Q9Y4R8	837 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	HTT	P42858	3142 aa		13.42	□□□□□ -0.26
RACK1-223	ENST00000510199	IGKV6D-21	A0A0A0MT36	114 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	POTEF	A5A3E0	1075 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	DYNC1LI2	O43237	492 aa	Predicted RBP	13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	MSC	O60682	206 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	DKC1	O60832	514 aa	Known RBP eCLIP	13.41	□□□□□ -0.26	1e-323	■□□□□ 8
RACK1-223	ENST00000510199	MED24	O75448	989 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	SLITRK3	O94933	977 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	MBD3	O95983	291 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	SPATA31C1	P0DKV0	1188 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	RARB	P10826	455 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	LIG1	P18858	919 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	PTGS1	P23219	599 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	TCF7	P36402	384 aa	Predicted RBP	13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	SYK	P43405	635 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	NDUFA8	P51970	172 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	FAM160A1	Q05DH4	1040 aa		13.41	□□□□□ -0.26
RACK1-223	ENST00000510199	GRB10	Q13322	594 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms