RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 USP54Q70EL1 1684 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 SOS1Q07889 1333 aaPredicted RBP2.6□□□□□ -1.99
CAST-226ENST00000509529 SALL3Q9BXA9 1300 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 EIF3CLB5ME19 914 aaKnown RBP2.6□□□□□ -1.99
CAST-226ENST00000509529 TBC1D8O95759 1140 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 ABL1P00519 1130 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 BMP6P22004 513 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 CAP2P40123 477 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 FNTAP49354 379 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 ZNF75DP51815 510 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 INPP5AQ14642 412 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 SNX17Q15036 470 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 ZNF827Q17R98 1081 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 GJC2Q5T442 439 aaPredicted RBP2.6□□□□□ -1.99
CAST-226ENST00000509529 RASIP1Q5U651 963 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 ATL3Q6DD88 541 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 CNKSR3Q6P9H4 555 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 SIRT2Q8IXJ6 389 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 CCDC170Q8IYT3 715 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 LINC01356Q8N9X3 169 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 TP53I13Q8NBR0 393 aaPredicted RBP2.6□□□□□ -1.99
CAST-226ENST00000509529 CCDC150Q8NCX0 1101 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 FAM71BQ8TC56 605 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 LZICQ8WZA0 190 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 RUNDC1Q96C34 613 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 COX4I2Q96KJ9 171 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 EIF3CQ99613 913 aaKnown RBP2.6□□□□□ -1.99
CAST-226ENST00000509529 MENTQ9BUN1 341 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 CARD11Q9BXL7 1154 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 SCAND2PQ9GZW5 306 aaPredicted RBP2.6□□□□□ -1.99
CAST-226ENST00000509529 GZF1Q9H116 711 aaPredicted RBP2.6□□□□□ -1.99
CAST-226ENST00000509529 ATP6V0A4Q9HBG4 840 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 ITGB1BP2Q9UKP3 347 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 ATP6V1DQ9Y5K8 247 aa2.6□□□□□ -1.99
CAST-226ENST00000509529 PPLO60437 1756 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 NPHP3Q7Z494 1330 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 RIMS2Q9UQ26 1411 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 ARHGEF28Q8N1W1 1705 aaKnown RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 PARP4Q9UKK3 1724 aaKnown RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 KIF20BQ96Q89 1820 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 MYO5BQ9ULV0 1848 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 ST20-MTHFSA0A0A6YYL1 179 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 MPHOSPH10O00566 681 aaKnown RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 PPFIA2O75334 1257 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 PAGE1O75459 146 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 EPB41P11171 864 aaKnown RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 CYP7A1P22680 504 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 ALDH1B1P30837 517 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 VIPR1P32241 457 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 PEX19P40855 299 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 CLCN2P51788 898 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 CCZ1BP86790 482 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 CCZ1P86791 482 aaPredicted RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 LRRFIP1Q32MZ4 808 aaKnown RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 AMOTQ4VCS5 1084 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 CC2D1AQ6P1N0 951 aaPredicted RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 LRFN4Q6PJG9 635 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 PI16Q6UXB8 463 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 CCAR2Q8N163 923 aaKnown RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 CTCFLQ8NI51 663 aaPredicted RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 CCDC26Q8TAB7 109 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 KLHDC4Q8TBB5 520 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 PPP1R13LQ8WUF5 828 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 VWCEQ96DN2 955 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 TMX3Q96JJ7 454 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 MPHOSPH8Q99549 860 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 FUT8Q9BYC5 575 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 VEZTQ9HBM0 779 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 AKAP2Q9Y2D5 859 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 PCDHA11Q9Y5I1 949 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.59□□□□□ -1.994e-6■■□□□ 11.8
CAST-226ENST00000509529 LRRFIP2Q9Y608 721 aaKnown RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 ATP10BO94823 1461 aa2.59□□□□□ -1.99
CAST-226ENST00000509529 ZNF644Q9H582 1327 aaPredicted RBP2.59□□□□□ -1.99
CAST-226ENST00000509529 CHUKO15111 745 aa2.59□□□□□ -2
CAST-226ENST00000509529 IPO8O15397 1037 aaKnown RBP2.59□□□□□ -2
CAST-226ENST00000509529 AHCYL1O43865 530 aa2.59□□□□□ -2
CAST-226ENST00000509529 FESP07332 822 aa2.59□□□□□ -2
CAST-226ENST00000509529 SETSIPP0DME0 302 aa2.59□□□□□ -2
CAST-226ENST00000509529 TNNT1P13805 278 aa2.59□□□□□ -2
CAST-226ENST00000509529 HMGA2P52926 109 aa2.59□□□□□ -2
CAST-226ENST00000509529 IFFO1Q0D2I5 559 aa2.59□□□□□ -2
CAST-226ENST00000509529 RIPK1Q13546 671 aa2.59□□□□□ -2
CAST-226ENST00000509529 INTS3Q68E01 1043 aaKnown RBP2.59□□□□□ -2
CAST-226ENST00000509529 KLHL10Q6JEL2 608 aa2.59□□□□□ -2
CAST-226ENST00000509529 WDR93Q6P2C0 686 aa2.59□□□□□ -2
CAST-226ENST00000509529 CRELD2Q6UXH1 353 aaPredicted RBP2.59□□□□□ -2
CAST-226ENST00000509529 KRBA2Q6ZNG9 492 aa2.59□□□□□ -2
CAST-226ENST00000509529 ZNF662Q6ZS27 426 aa2.59□□□□□ -2
CAST-226ENST00000509529 UBE3BQ7Z3V4 1068 aa2.59□□□□□ -2
CAST-226ENST00000509529 GPATCH11Q8N954 259 aa2.59□□□□□ -2
CAST-226ENST00000509529 LEO1Q8WVC0 666 aaPredicted RBP2.59□□□□□ -2
CAST-226ENST00000509529 DNAAF4Q8WXU2 420 aa2.59□□□□□ -2
CAST-226ENST00000509529 PBXIP1Q96AQ6 731 aa2.59□□□□□ -2
CAST-226ENST00000509529 CCDC28BQ9BUN5 200 aa2.59□□□□□ -2
CAST-226ENST00000509529 DDX19AQ9NUU7 478 aaKnown RBP2.59□□□□□ -2
CAST-226ENST00000509529 GMEB1Q9Y692 573 aa2.59□□□□□ -2
CAST-226ENST00000509529 MRVI1Q9Y6F6 885 aa2.59□□□□□ -2
CAST-226ENST00000509529 MRC1P22897 1456 aa2.58□□□□□ -2
CAST-226ENST00000509529 XRN1Q8IZH2 1706 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms