RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CTAGE1Q96RT6 745 aa21.27■■□□□ 1
UBE3D-207ENST00000509102 NCOA5Q9HCD5 579 aaKnown RBP21.27■■□□□ 1
UBE3D-207ENST00000509102 TMEM260Q9NX78 707 aa21.27■■□□□ 1
UBE3D-207ENST00000509102 ERAP1Q9NZ08 941 aa21.27■■□□□ 1
UBE3D-207ENST00000509102 GRXCR1A8MXD5 290 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 THPOP40225 353 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 KCNJ6P48051 423 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 TRIM50Q86XT4 487 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 DHX38Q92620 1227 aaKnown RBP21.26■□□□□ 0.99
UBE3D-207ENST00000509102 SLC9A7Q96T83 725 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 CDX2Q99626 313 aaPredicted RBP21.26■□□□□ 0.99
UBE3D-207ENST00000509102 TTYH1Q9H313 450 aaPredicted RBP21.26■□□□□ 0.99
UBE3D-207ENST00000509102 SMARCAD1Q9H4L7 1026 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 ZNF576Q9H609 170 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 AZI2Q9H6S1 392 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 SLC9A2Q9UBY0 812 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 EMSYQ7Z589 1322 aa21.26■□□□□ 0.99
UBE3D-207ENST00000509102 CDKL5O76039 1030 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 ZNF200P98182 395 aaPredicted RBP21.25■□□□□ 0.99
UBE3D-207ENST00000509102 NTRK3Q16288 839 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 PKN1Q16512 942 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 NIPA1Q7RTP0 329 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 RNPEPQ9H4A4 650 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 SLC28A3Q9HAS3 691 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 SH3GLB2Q9NR46 395 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 TCEAL9Q9UHQ7 104 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 NFASCO94856 1347 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 NRCAMQ92823 1304 aa21.25■□□□□ 0.99
UBE3D-207ENST00000509102 EFCAB14O75071 495 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 CAND2O75155 1236 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 PBX2P40425 430 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 SETQ01105 290 aaPredicted RBP21.24■□□□□ 0.99
UBE3D-207ENST00000509102 STK3Q13188 491 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 ANKRD1Q15327 319 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 CNKSR3Q6P9H4 555 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 PHOSPHO2Q8TCD6 241 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 SETD4Q9NVD3 440 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 DOCK5Q9H7D0 1870 aa21.24■□□□□ 0.99
UBE3D-207ENST00000509102 GSTTP1A0A1W2PQM5 241 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 RSPH10B2B2RC85 870 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 KIF28PB7ZC32 967 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 MEIS1O00470 390 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 PPFIA3O75145 1194 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 DEXIO95424 95 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 RSPH10BP0C881 870 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 FOSL2P15408 326 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 HOXC8P31273 242 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 NLRP5P59047 1200 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 TRIM71Q2Q1W2 868 aaKnown RBP21.23■□□□□ 0.99
UBE3D-207ENST00000509102 ZNF618Q5T7W0 954 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 PLA2G4DQ86XP0 818 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 CYP2W1Q8TAV3 490 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 VWCEQ96DN2 955 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 AGO4Q9HCK5 861 aaKnown RBP21.23■□□□□ 0.99
UBE3D-207ENST00000509102 PCDHA11Q9Y5I1 949 aa21.23■□□□□ 0.99
UBE3D-207ENST00000509102 SCN5AQ14524 2016 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 TREHO43280 583 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 CYP3A4P08684 503 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 ARP10275 920 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 MARK3P27448 753 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 PPFIA1Q13136 1202 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 RSPH3Q86UC2 560 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 SLC17A8Q8NDX2 589 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 MYLIPQ8WY64 445 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 C22orf23Q9BZE7 217 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 SLKQ9H2G2 1235 aaPredicted RBP21.22■□□□□ 0.99
UBE3D-207ENST00000509102 VPS54Q9P1Q0 977 aa21.22■□□□□ 0.99
UBE3D-207ENST00000509102 TRIP12Q14669 1992 aaPredicted RBP21.22■□□□□ 0.99
UBE3D-207ENST00000509102 ABHD14A-ACY1A0A1B0GW23 586 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 CXCL10P02778 98 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 ACTR2P61160 394 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 IKBKEQ14164 716 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 HIC1Q14526 733 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 TAF2Q6P1X5 1199 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 FAM177A1Q8N128 213 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-207ENST00000509102 LMBR1Q8WVP7 490 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 GAS2L1Q99501 681 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-207ENST00000509102 LARP6Q9BRS8 491 aaKnown RBP21.21■□□□□ 0.99
UBE3D-207ENST00000509102 NKX2-4Q9H2Z4 354 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 TELO2Q9Y4R8 837 aa21.21■□□□□ 0.99
UBE3D-207ENST00000509102 NBNO60934 754 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 RPLP2P05387 115 aaKnown RBP21.2■□□□□ 0.98
UBE3D-207ENST00000509102 XBP1P17861 261 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 RABGGTBP53611 331 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 GRIN2CQ14957 1233 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 PPP2R2DQ66LE6 453 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 WNT8BQ93098 351 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 ZNF577Q9BSK1 485 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 TBC1D22BQ9NU19 505 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 TRPC6Q9Y210 931 aa21.2■□□□□ 0.98
UBE3D-207ENST00000509102 COL6A3P12111 3177 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 RRN3P2A6NIE6 340 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 FAM86B1E9PN63 330 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 IPO5O00410 1097 aaKnown RBP21.19■□□□□ 0.98
UBE3D-207ENST00000509102 LGR5O75473 907 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 FAM86B2P0C5J1 330 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 SLC26A2P50443 739 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 STAT5BP51692 787 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 GRIK4Q16099 956 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 FAM160B1Q5W0V3 765 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms