RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 SUN2Q9UH99 717 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 GGT7Q9UJ14 662 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 SALL4Q9UJQ4 1053 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 ANGEL1Q9UNK9 670 aaKnown RBP10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 TRIM33Q9UPN9 1127 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
PDGFRA-207ENST00000509092 XDHP47989 1333 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 MROH7Q68CQ1 1323 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 RANBP6O60518 1105 aaKnown RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 LGR5O75473 907 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 GJB6O95452 261 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 RXRBP28702 533 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 MAGEA1P43355 309 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 PTDSS1P48651 473 aaKnown RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 CACNA2D1P54289 1103 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 GALNT17Q6IS24 598 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 KLHL7Q8IXQ5 586 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 SYMPKQ92797 1274 aaKnown RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 UTP4Q969X6 686 aaKnown RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 PPP1R14BQ96C90 147 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 MTMR8Q96EF0 704 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 ZNF333Q96JL9 665 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 EYA1Q99502 592 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 MTFR1LQ9H019 292 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 ARHGAP20Q9P2F6 1191 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 FLT4P35916 1363 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 NVLO15381 856 aaKnown RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 GTPBP6O43824 516 aaPredicted RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 PFDN1O60925 122 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 KCNA3P22001 575 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 GJA8P48165 433 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 KLK7P49862 253 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 USP46P62068 366 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 MCL1Q07820 350 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 SSRP1Q08945 709 aaKnown RBP10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 TMED1Q13445 227 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 CNPY1Q3B7I2 92 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 CC2D2BQ6DHV5 1058 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 APOA5Q6Q788 366 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 CEP128Q6ZU80 1094 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 SMYD1Q8NB12 490 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 SMC1BQ8NDV3 1235 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 SLC35B4Q969S0 331 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 PGM2Q96G03 612 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 NLRP3Q96P20 1036 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 UBAC1Q9BSL1 405 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 FAM114A2Q9NRY5 505 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 PLAGL2Q9UPG8 496 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 ARL2BPQ9Y2Y0 163 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 CD2APQ9Y5K6 639 aa10.92□□□□□ -0.66
PDGFRA-207ENST00000509092 DISP2A7MBM2 1401 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 MYH4Q9Y623 1939 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 MAGEA13PA6NCF6 341 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 CES2O00748 559 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 TPD52L2O43399 206 aaKnown RBP10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 E2F6O75461 281 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 FLT3P36888 993 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 EIF4A3P38919 411 aaKnown RBP10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 PRCPP42785 496 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 RASSF7Q02833 373 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 LSAMPQ13449 338 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 BICDL1Q6ZP65 573 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 DDX42Q86XP3 938 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 AGGF1Q8N302 714 aaeCLIP10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 SLC17A8Q8NDX2 589 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 NUDCD1Q96RS6 583 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 HAPLN3Q96S86 360 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 BLZF1Q9H2G9 400 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 LRRC4CQ9HCJ2 640 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
PDGFRA-207ENST00000509092 CETN3O15182 167 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 PRPF3O43395 683 aaKnown RBP10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 AKR1B10O60218 316 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 VIL1P09327 827 aaKnown RBP10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 SKIP12755 728 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 RXRAP19793 462 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 RCN2Q14257 317 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 WASHC2DQ5SRD0 308 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 TBC1D16Q8TBP0 767 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 PCMTD1Q96MG8 357 aaPredicted RBP10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 MTRQ99707 1265 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 SLC26A6Q9BXS9 759 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 TXLNGQ9NUQ3 528 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 RHBDL2Q9NX52 303 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 COMMD3-BMI1R4GMX3 469 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 TRIM49BA6NDI0 452 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 ZBTB43O43298 467 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 BUB1O43683 1085 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 TJP3O95049 919 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 UNC5CO95185 931 aa10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 LMNAP02545 664 aaKnown RBP10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.66
PDGFRA-207ENST00000509092 CCDC15Q0P6D6 951 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms