RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 HYIQ5T013 277 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 ZNF746Q6NUN9 644 aaPredicted RBP11.66□□□□□ -0.54
RFC1-211ENST00000509084 B3GNT9Q6UX72 402 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 SMAP1Q8IYB5 467 aaPredicted RBP11.66□□□□□ -0.54
RFC1-211ENST00000509084 ELOA2Q8IYF1 753 aaPredicted RBP11.66□□□□□ -0.54
RFC1-211ENST00000509084 CEP57L1Q8IYX8 460 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
RFC1-211ENST00000509084 TRIM47Q96LD4 638 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 NUP62CLQ9H1M0 184 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 JPH1Q9HDC5 661 aaPredicted RBP11.66□□□□□ -0.54
RFC1-211ENST00000509084 TUFT1Q9NNX1 390 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 STK17AQ9UEE5 414 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 GJD2Q9UKL4 321 aa11.66□□□□□ -0.54
RFC1-211ENST00000509084 RBM47A0AV96 593 aaKnown RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 NKRFO15226 690 aaKnown RBP eCLIP11.65□□□□□ -0.54
RFC1-211ENST00000509084 POLR2DO15514 142 aaKnown RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 DHX15O43143 795 aaKnown RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
RFC1-211ENST00000509084 LETM1O95202 739 aaPredicted RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 CYP2B6P20813 491 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 UBA1P22314 1058 aaKnown RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 RPA1P27694 616 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 STAT6P42226 847 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 ITGB3BPQ13352 177 aaPredicted RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 SNW1Q13573 536 aaKnown RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 RRAGBQ5VZM2 374 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 CAVIN1Q6NZI2 390 aaKnown RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 METTL7BQ6UX53 244 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 USP49Q70CQ1 688 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 MIER3Q7Z3K6 550 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 FBXO16Q8IX29 292 aaPredicted RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 POLR3CQ9BUI4 534 aaPredicted RBP11.65□□□□□ -0.54
RFC1-211ENST00000509084 UNC45AQ9H3U1 944 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 CLSTN2Q9H4D0 955 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 PKD2L1Q9P0L9 805 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 SLC9A2Q9UBY0 812 aa11.65□□□□□ -0.54
RFC1-211ENST00000509084 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 PP2D1A8MPX8 630 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 DDX39AO00148 427 aaKnown RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 CHMP2AO43633 222 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 ATP9AO75110 1047 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 SLFN14P0C7P3 912 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 CTGFP29279 349 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 CCT6AP40227 531 aaKnown RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 FLT3LGP49771 235 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 ACVR2BQ13705 512 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 KARSQ15046 597 aaKnown RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 MFSD14CQ5VZR4 134 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 EEPD1Q7L9B9 569 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 PDILTQ8N807 584 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 SLC39A7Q92504 469 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 GJA10Q969M2 543 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 DHX58Q96C10 678 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 EIF2AK1Q9BQI3 630 aaKnown RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 MMTAG2Q9BU76 263 aaKnown RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 LRRC27Q9C0I9 530 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 KATNBL1Q9H079 304 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 SRRDQ9UH36 339 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 DDX41Q9UJV9 622 aaKnown RBP11.64□□□□□ -0.55
RFC1-211ENST00000509084 SAMM50Q9Y512 469 aa11.64□□□□□ -0.55
RFC1-211ENST00000509084 MCM3APO60318 1980 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 ECM2O94769 699 aaPredicted RBP11.63□□□□□ -0.55
RFC1-211ENST00000509084 FARP2O94887 1054 aaPredicted RBP11.63□□□□□ -0.55
RFC1-211ENST00000509084 GGPS1O95749 300 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 MYL1P05976 194 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 P4HBP07237 508 aaKnown RBP11.63□□□□□ -0.55
RFC1-211ENST00000509084 PSAPP07602 524 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 TXNP10599 105 aaKnown RBP11.63□□□□□ -0.55
RFC1-211ENST00000509084 PLCG1P19174 1290 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 CDC25AP30304 524 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 GRB10Q13322 594 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 E2F4Q16254 413 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 TMEM119Q4V9L6 283 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 CELF3Q5SZQ8 465 aaKnown RBP11.63□□□□□ -0.55
RFC1-211ENST00000509084 IQSEC1Q6DN90 963 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 MIS18BP1Q6P0N0 1132 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 CCDC62Q6P9F0 684 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 ATP6V0A1Q93050 837 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 UIMC1Q96RL1 719 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 MLXIPQ9HAP2 919 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 TMEM63CQ9P1W3 806 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 ZHX1Q9UKY1 873 aaPredicted RBP11.63□□□□□ -0.55
RFC1-211ENST00000509084 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 PCDHA10Q9Y5I2 948 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 ZSWIM8A7E2V4 1837 aa11.63□□□□□ -0.55
RFC1-211ENST00000509084 LOXHD1Q8IVV2 1947 aa11.62□□□□□ -0.55
RFC1-211ENST00000509084 A0A087X0B3 334 aa11.62□□□□□ -0.55
RFC1-211ENST00000509084 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
RFC1-211ENST00000509084 EML1O00423 815 aa11.62□□□□□ -0.55
RFC1-211ENST00000509084 NOP56O00567 594 aaKnown RBP11.62□□□□□ -0.55
RFC1-211ENST00000509084 ACTN4O43707 911 aaKnown RBP11.62□□□□□ -0.55
RFC1-211ENST00000509084 GH1P01241 217 aa11.62□□□□□ -0.55
RFC1-211ENST00000509084 IGHA2P01877 340 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms