RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 JAG1P78504 1218 aa10.31□□□□□ -0.76
CHD1-205ENST00000508756 VMACQ2NL98 169 aa10.31□□□□□ -0.76
CHD1-205ENST00000508756 DDX53Q86TM3 631 aaKnown RBP10.31□□□□□ -0.76
CHD1-205ENST00000508756 NLGN4XQ8N0W4 816 aa10.31□□□□□ -0.76
CHD1-205ENST00000508756 C11orf84Q9BUA3 381 aaPredicted RBP10.31□□□□□ -0.76
CHD1-205ENST00000508756 NGRNQ9NPE2 291 aaKnown RBP10.31□□□□□ -0.76
CHD1-205ENST00000508756 MAGEC2Q9UBF1 373 aaPredicted RBP10.31□□□□□ -0.76
CHD1-205ENST00000508756 ATP23Q9Y6H3 246 aa10.31□□□□□ -0.76
CHD1-205ENST00000508756 FAM90A27PA6NNH2 459 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 B4E1Z4 1266 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 M0R2C6 588 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 JMJD7P0C870 316 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 FAHP16930 419 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 PTPN1P18031 435 aaKnown RBP10.3□□□□□ -0.76
CHD1-205ENST00000508756 VWA3BQ502W6 1294 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 PLEKHG4Q58EX7 1191 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 DALRD3Q5D0E6 543 aaKnown RBP10.3□□□□□ -0.76
CHD1-205ENST00000508756 BTBD8Q5XKL5 378 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 TMC5Q6UXY8 1006 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 EP400NLQ6ZTU2 488 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 NIM1KQ8IY84 436 aa10.3□□□□□ -0.76
CHD1-205ENST00000508756 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
CHD1-205ENST00000508756 NPTXRO95502 500 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 PIK3R6Q5UE93 754 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 TCERG1LQ5VWI1 586 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 CPZQ66K79 652 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 HHIPL2Q6UWX4 724 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 PROSER1Q86XN7 944 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 ADGRG2Q8IZP9 1017 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 ZSCAN18Q8TBC5 510 aaPredicted RBP10.29□□□□□ -0.76
CHD1-205ENST00000508756 INTS7Q9NVH2 962 aaKnown RBP10.29□□□□□ -0.76
CHD1-205ENST00000508756 RIC8BQ9NVN3 520 aa10.29□□□□□ -0.76
CHD1-205ENST00000508756 FFAR3O14843 346 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 DLX2Q07687 328 aaPredicted RBP10.28□□□□□ -0.76
CHD1-205ENST00000508756 SEC23AQ15436 765 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 LIPIQ6XZB0 460 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 SAPCD2Q86UD0 394 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 NOSTRINQ8IVI9 506 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 TMEM151BQ8IW70 566 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 ZNF526Q8TF50 670 aaPredicted RBP10.28□□□□□ -0.76
CHD1-205ENST00000508756 ZSWIM3Q96MP5 696 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 PCDH18Q9HCL0 1135 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 HSPBP1Q9NZL4 362 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 PLAAQ9Y263 795 aa10.28□□□□□ -0.76
CHD1-205ENST00000508756 A0A1B0GTL3 188 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.27□□□□□ -0.77
CHD1-205ENST00000508756 FAM83GA6ND36 823 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 MECP2P51608 486 aaKnown RBP10.27□□□□□ -0.77
CHD1-205ENST00000508756 ADAM9Q13443 819 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 TM4SF20Q53R12 229 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 CNNM4Q6P4Q7 775 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 LCNL1Q6ZST4 164 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 LRRTM3Q86VH5 581 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 C2orf69Q8N8R5 385 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 KYQ8NBH2 561 aa10.27□□□□□ -0.77
CHD1-205ENST00000508756 SPATA6Q9NWH7 488 aaPredicted RBP10.27□□□□□ -0.77
CHD1-205ENST00000508756 SCDO00767 359 aa10.26□□□□□ -0.77
CHD1-205ENST00000508756 ZSCAN22P10073 491 aaPredicted RBP10.26□□□□□ -0.77
CHD1-205ENST00000508756 LCE3BQ5TA77 95 aa10.26□□□□□ -0.77
CHD1-205ENST00000508756 CD276Q5ZPR3 534 aa10.26□□□□□ -0.77
CHD1-205ENST00000508756 CDCA2Q69YH5 1023 aaPredicted RBP10.26□□□□□ -0.77
CHD1-205ENST00000508756 MFSD3Q96ES6 412 aa10.26□□□□□ -0.77
CHD1-205ENST00000508756 SLC12A8A0AV02 714 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 KPNA6O60684 536 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 CLASP2O75122 1294 aaKnown RBP10.25□□□□□ -0.77
CHD1-205ENST00000508756 HSD3B2P26439 372 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 THBS2P35442 1172 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 FLT3P36888 993 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 RTP5Q14D33 572 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 CFAP100Q494V2 611 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 PHF19Q5T6S3 580 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 UBE2R2Q712K3 238 aaPredicted RBP10.25□□□□□ -0.77
CHD1-205ENST00000508756 TP53I13Q8NBR0 393 aaPredicted RBP10.25□□□□□ -0.77
CHD1-205ENST00000508756 CHST14Q8NCH0 376 aa10.25□□□□□ -0.77
CHD1-205ENST00000508756 TRAF5O00463 557 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 C4BPAP04003 597 aaKnown RBP10.24□□□□□ -0.77
CHD1-205ENST00000508756 GJA4P35212 333 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 GYS2P54840 703 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 CAP1Q01518 475 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 VASNQ6EMK4 673 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 TTLL6Q8N841 843 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 LINC01356Q8N9X3 169 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 WNK4Q96J92 1243 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 TMEM209Q96SK2 561 aa10.24□□□□□ -0.77
CHD1-205ENST00000508756 TARS2Q9BW92 718 aaKnown RBP10.24□□□□□ -0.77
CHD1-205ENST00000508756 PRAMEF25A6NGN4 478 aa10.23□□□□□ -0.77
CHD1-205ENST00000508756 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
CHD1-205ENST00000508756 KRT37O76014 449 aa10.23□□□□□ -0.77
CHD1-205ENST00000508756 NEK4P51957 841 aa10.23□□□□□ -0.77
CHD1-205ENST00000508756 OTOP1Q7RTM1 612 aa10.23□□□□□ -0.77
CHD1-205ENST00000508756 CBX4O00257 560 aa10.22□□□□□ -0.77
CHD1-205ENST00000508756 ZBTB48P10074 688 aaPredicted RBP10.22□□□□□ -0.77
CHD1-205ENST00000508756 IRF9Q00978 393 aa10.22□□□□□ -0.77
CHD1-205ENST00000508756 DBPQ10586 325 aaPredicted RBP10.22□□□□□ -0.77
CHD1-205ENST00000508756 PKN3Q6P5Z2 889 aa10.22□□□□□ -0.77
CHD1-205ENST00000508756 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
CHD1-205ENST00000508756 DDX1Q92499 740 aaKnown RBP10.22□□□□□ -0.77
CHD1-205ENST00000508756 BOCQ9BWV1 1114 aa10.22□□□□□ -0.77
CHD1-205ENST00000508756 CABP5Q9NP86 173 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms