RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 PRPHP41219 470 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 NASPP49321 788 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 CPT1AP50416 773 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 ACLYP53396 1101 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 SF3A1Q15459 793 aaKnown RBP16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 LRCH2Q5VUJ6 765 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 RNF180Q86T96 592 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 SDF4Q9BRK5 362 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 CIZ1Q9ULV3 898 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 ELP1O95163 1332 aa16.9■□□□□ 0.3
CALCOCO2-211ENST00000508679 MOXD2PA6NHM9 499 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 DDX39AO00148 427 aaKnown RBP16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 F2P00734 622 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 OR52Z1P0C646 297 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 ATP4AP20648 1035 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 KRT76Q01546 638 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 SLC43A3Q8NBI5 491 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 TEKT3Q9BXF9 490 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 TTC12Q9H892 705 aaPredicted RBP16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.3
CALCOCO2-211ENST00000508679 EMSYQ7Z589 1322 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 ARID2Q68CP9 1835 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 LAD1O00515 517 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 GAS7O60861 476 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 STBD1O95210 358 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 LGALS2P05162 132 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 TCF7P36402 384 aaPredicted RBP16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 CCDC60Q8IWA6 550 aaPredicted RBP16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 SMAP1Q8IYB5 467 aaPredicted RBP16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 IGSF22Q8N9C0 903 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 PCSK9Q8NBP7 692 aaKnown RBP16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 AFAP1L1Q8TED9 768 aa16.89■□□□□ 0.29
CALCOCO2-211ENST00000508679 KAT6AQ92794 2004 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 A0A1W2PQ45 241 aaPredicted RBP16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 A0A1W2PQY0 241 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 KPNA6O60684 536 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 SUPT20HL2P0C7V6 817 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 TXKP42681 527 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 SOX10P56693 466 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 NUCB2P80303 420 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 GRIN1Q05586 938 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 SNX17Q15036 470 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 DGKDQ16760 1214 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 ARL6IP4Q66PJ3 421 aaKnown RBP16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 TRIM50Q86XT4 487 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 LINC00301Q8NCQ3 95 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 RDM1Q8NG50 284 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 SPC25Q9HBM1 224 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 PCDHA12Q9UN75 941 aa16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 MAFBQ9Y5Q3 323 aaPredicted RBP16.88■□□□□ 0.29
CALCOCO2-211ENST00000508679 IGSF9BQ9UPX0 1349 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 ZNF862O60290 1169 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 HOXC8P31273 242 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 CDK7P50613 346 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 SP4Q02446 784 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 HIC1Q14526 733 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 UGCGQ16739 394 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 PAWRQ96IZ0 340 aaKnown RBP16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 HSD17B14Q9BPX1 270 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 WRAP73Q9P2S5 460 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 TFIP11Q9UBB9 837 aaKnown RBP16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 FBXO2Q9UK22 296 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 PCDHA10Q9Y5I2 948 aa16.87■□□□□ 0.29
CALCOCO2-211ENST00000508679 POTEMA6NI47 508 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 WDR64B1ANS9 1081 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 ZNF286BP0CG31 522 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 SFNP31947 248 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 PDIA5Q14554 519 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 EPHA7Q15375 998 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 C1orf53Q5VUE5 145 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 PLPPR4Q7Z2D5 763 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 MTG1Q9BT17 334 aaPredicted RBP16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 RCOR1Q9UKL0 485 aa16.86■□□□□ 0.29
CALCOCO2-211ENST00000508679 KBTBD13C9JR72 458 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 NOP56O00567 594 aaKnown RBP16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 CABYRO75952 493 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 YEATS4O95619 227 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 BMP15O95972 392 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 MYL3P08590 195 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 SPATA31C1P0DKV0 1188 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 TECP42680 631 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 JAK3P52333 1124 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 PSMC6P62333 389 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 ADAM17P78536 824 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 FERMT2Q96AC1 680 aa16.85■□□□□ 0.29
CALCOCO2-211ENST00000508679 RNPEPQ9H4A4 650 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms