RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
GYPA-205ENST00000508337 ZNF460Q14592 562 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 HABP4Q5JVS0 413 aaKnown RBP7.36□□□□□ -1.23
GYPA-205ENST00000508337 PRAMEF18Q5VWM3 479 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 TMEFF1Q8IYR6 380 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 TTLL6Q8N841 843 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 WDR48Q8TAF3 677 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 WNK4Q96J92 1243 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 ZSWIM3Q96MP5 696 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 PCIF1Q9H4Z3 704 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 NTMQ9P121 344 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 CROTQ9UKG9 612 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 ZKSCAN5Q9Y2L8 839 aa7.36□□□□□ -1.23
GYPA-205ENST00000508337 MAN2B1O00754 1011 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 KPNA6O60684 536 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 FBXO21O94952 628 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 FAHP16930 419 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 SDSP20132 328 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 HSD3B2P26439 372 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 STK32CQ86UX6 486 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 PPM1KQ8N3J5 372 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 KYQ8NBH2 561 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 CHST14Q8NCH0 376 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 GORASP1Q9BQQ3 440 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 BOCQ9BWV1 1114 aa7.35□□□□□ -1.23
GYPA-205ENST00000508337 GAS7O60861 476 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 GLRX3O76003 335 aaKnown RBP7.34□□□□□ -1.23
GYPA-205ENST00000508337 CKMP06732 381 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 ZSCAN22P10073 491 aaPredicted RBP7.34□□□□□ -1.23
GYPA-205ENST00000508337 ITGA1P56199 1179 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 IRF9Q00978 393 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 ARHGAP44Q17R89 818 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 CR1LQ2VPA4 569 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 CPZQ66K79 652 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 PKN3Q6P5Z2 889 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 AHI1Q8N157 1196 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 FNIP1Q8TF40 1166 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 CLEC4DQ8WXI8 215 aa7.34□□□□□ -1.23
GYPA-205ENST00000508337 C11orf84Q9BUA3 381 aaPredicted RBP7.34□□□□□ -1.23
GYPA-205ENST00000508337 H7C1D1 291 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 LRG1P02750 347 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 ENO2P09104 434 aaPredicted RBP7.33□□□□□ -1.24
GYPA-205ENST00000508337 CFPP27918 469 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 EPHA5P54756 1037 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 LACTBP83111 547 aaPredicted RBP7.33□□□□□ -1.24
GYPA-205ENST00000508337 TMEM132BQ14DG7 1078 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 ZNF174Q15697 407 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 VMACQ2NL98 169 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 CDCA2Q69YH5 1023 aaPredicted RBP7.33□□□□□ -1.24
GYPA-205ENST00000508337 LRRTM3Q86VH5 581 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 HIPK4Q8NE63 616 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 SH3RF2Q8TEC5 729 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 NOX5Q96PH1 765 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.33□□□□□ -1.24
GYPA-205ENST00000508337 SMURF1Q9HCE7 757 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 DLL4Q9NR61 685 aa7.33□□□□□ -1.24
GYPA-205ENST00000508337 TCRBV5S4A2TA0A5A2 114 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 CLASP2O75122 1294 aaKnown RBP7.32□□□□□ -1.24
GYPA-205ENST00000508337 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
GYPA-205ENST00000508337 AMY2AP04746 511 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 AMY2BP19961 511 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 PLEKHG4Q58EX7 1191 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 CT47A1Q5JQC4 288 aaPredicted RBP7.32□□□□□ -1.24
GYPA-205ENST00000508337 CD276Q5ZPR3 534 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 HHIPL2Q6UWX4 724 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 OVCH1Q7RTY7 1134 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 KIAA0907Q7Z7F0 614 aaPredicted RBP7.32□□□□□ -1.24
GYPA-205ENST00000508337 SP8Q8IXZ3 490 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 DACT3Q96B18 629 aaPredicted RBP7.32□□□□□ -1.24
GYPA-205ENST00000508337 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 L2HGDHQ9H9P8 463 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 KCNH7Q9NS40 1196 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 TELO2Q9Y4R8 837 aa7.32□□□□□ -1.24
GYPA-205ENST00000508337 PTPDC1A2A3K4 754 aa7.31□□□□□ -1.24
GYPA-205ENST00000508337 SASH1O94885 1247 aa7.31□□□□□ -1.24
GYPA-205ENST00000508337 MYCLP1P12525 358 aaPredicted RBP7.31□□□□□ -1.24
GYPA-205ENST00000508337 SKIDA1Q1XH10 827 aa7.31□□□□□ -1.24
GYPA-205ENST00000508337 ABHD17CQ6PCB6 329 aa7.31□□□□□ -1.24
GYPA-205ENST00000508337 EPB41L4AQ9HCS5 686 aaPredicted RBP7.31□□□□□ -1.24
GYPA-205ENST00000508337 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
GYPA-205ENST00000508337 IFT57Q9NWB7 429 aa7.31□□□□□ -1.24
GYPA-205ENST00000508337 ARHGAP20Q9P2F6 1191 aa7.31□□□□□ -1.24
GYPA-205ENST00000508337 CYP1A1P04798 512 aaPredicted RBP7.3□□□□□ -1.24
GYPA-205ENST00000508337 THBS2P35442 1172 aa7.3□□□□□ -1.24
GYPA-205ENST00000508337 GLRBP48167 497 aa7.3□□□□□ -1.24
GYPA-205ENST00000508337 SARSP49591 514 aaKnown RBP7.3□□□□□ -1.24
GYPA-205ENST00000508337 DALRD3Q5D0E6 543 aaKnown RBP7.3□□□□□ -1.24
GYPA-205ENST00000508337 TRMT10BQ6PF06 316 aaKnown RBP7.3□□□□□ -1.24
GYPA-205ENST00000508337 SAPCD2Q86UD0 394 aa7.3□□□□□ -1.24
GYPA-205ENST00000508337 LINC01356Q8N9X3 169 aa7.3□□□□□ -1.24
GYPA-205ENST00000508337 ERCC4Q92889 916 aaPredicted RBP7.3□□□□□ -1.24
GYPA-205ENST00000508337 FTSJ1Q9UET6 329 aa7.3□□□□□ -1.24
GYPA-205ENST00000508337 FAM90A27PA6NNH2 459 aa7.29□□□□□ -1.24
GYPA-205ENST00000508337 FOXP2O15409 715 aa7.29□□□□□ -1.24
GYPA-205ENST00000508337 PDE8AO60658 829 aa7.29□□□□□ -1.24
GYPA-205ENST00000508337 BMP7P18075 431 aa7.29□□□□□ -1.24
GYPA-205ENST00000508337 CNGA1P29973 690 aa7.29□□□□□ -1.24
GYPA-205ENST00000508337 SCNN1BP51168 640 aa7.29□□□□□ -1.24
GYPA-205ENST00000508337 KIF11P52732 1056 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms