RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CTAGE1Q96RT6 745 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 AZI2Q9H6S1 392 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 UPF2Q9HAU5 1272 aaKnown RBP22.61■■□□□ 1.21
SFXN1-209ENST00000508290 TBC1D22BQ9NU19 505 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 TCEAL9Q9UHQ7 104 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 LAMA3Q16787 3333 aa22.61■■□□□ 1.21
SFXN1-209ENST00000508290 IGLV3-22A0A075B6J6 115 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 TMEM265A0A087WTH1 108 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 FAM86B1E9PN63 330 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 RPLP2P05387 115 aaKnown RBP22.6■■□□□ 1.21
SFXN1-209ENST00000508290 FAM86B2P0C5J1 330 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 SMIM10L2AP0DMW4 78 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 SMIM10L2BP0DMW5 78 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 ACTN1P12814 892 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 UTP14CQ5TAP6 766 aaKnown RBP22.6■■□□□ 1.21
SFXN1-209ENST00000508290 SERINC5Q86VE9 423 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 CYP2W1Q8TAV3 490 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 MYH7BA7E2Y1 1941 aa22.6■■□□□ 1.21
SFXN1-209ENST00000508290 GSTTP1A0A1W2PQM5 241 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 IPO5O00410 1097 aaKnown RBP22.59■■□□□ 1.21
SFXN1-209ENST00000508290 PPFIA3O75145 1194 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 LGR5O75473 907 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 ARP10275 920 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 LRRC8DQ7L1W4 858 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 GLG1Q92896 1179 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 ATP6V0A1Q93050 837 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 PKD2L1Q9P0L9 805 aa22.59■■□□□ 1.21
SFXN1-209ENST00000508290 RBM25P49756 843 aaKnown RBP22.58■■□□□ 1.21
SFXN1-209ENST00000508290 ACTR2P61160 394 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 ITGB3BPQ13352 177 aaPredicted RBP22.58■■□□□ 1.21
SFXN1-209ENST00000508290 ME3Q16798 604 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 MOXD1Q6UVY6 613 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 PLPPR4Q7Z2D5 763 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 KRT25Q7Z3Z0 450 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 SCLYQ96I15 445 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 ZNF577Q9BSK1 485 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 RNPEPQ9H4A4 650 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 LIMCH1Q9UPQ0 1083 aa22.58■■□□□ 1.21
SFXN1-209ENST00000508290 ATG7O95352 703 aa22.57■■□□□ 1.2
SFXN1-209ENST00000508290 ACRP10323 421 aa22.57■■□□□ 1.2
SFXN1-209ENST00000508290 CKBP12277 381 aa22.57■■□□□ 1.2
SFXN1-209ENST00000508290 TRIM50Q86XT4 487 aa22.57■■□□□ 1.2
SFXN1-209ENST00000508290 SMAP1Q8IYB5 467 aaPredicted RBP22.57■■□□□ 1.2
SFXN1-209ENST00000508290 RASGRP4Q8TDF6 673 aa22.57■■□□□ 1.2
SFXN1-209ENST00000508290 PPP1R13LQ8WUF5 828 aa22.57■■□□□ 1.2
SFXN1-209ENST00000508290 DHX38Q92620 1227 aaKnown RBP22.57■■□□□ 1.2
SFXN1-209ENST00000508290 PHF20Q9BVI0 1012 aa22.57■■□□□ 1.2
SFXN1-209ENST00000508290 ORC3Q9UBD5 711 aaPredicted RBP22.57■■□□□ 1.2
SFXN1-209ENST00000508290 RRN3P2A6NIE6 340 aa22.56■■□□□ 1.2
SFXN1-209ENST00000508290 M0R2N6 131 aa22.56■■□□□ 1.2
SFXN1-209ENST00000508290 BAIAP3O94812 1187 aa22.56■■□□□ 1.2
SFXN1-209ENST00000508290 KRT76Q01546 638 aa22.56■■□□□ 1.2
SFXN1-209ENST00000508290 PRR16Q569H4 304 aa22.56■■□□□ 1.2
SFXN1-209ENST00000508290 ZNF746Q6NUN9 644 aaPredicted RBP22.56■■□□□ 1.2
SFXN1-209ENST00000508290 TAF2Q6P1X5 1199 aa22.56■■□□□ 1.2
SFXN1-209ENST00000508290 BRMS1Q9HCU9 246 aa22.56■■□□□ 1.2
SFXN1-209ENST00000508290 STAT5BP51692 787 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 PPFIA1Q13136 1202 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 NONOQ15233 471 aaKnown RBP eCLIP22.55■■□□□ 1.2
SFXN1-209ENST00000508290 TRIM71Q2Q1W2 868 aaKnown RBP22.55■■□□□ 1.2
SFXN1-209ENST00000508290 ZNF697Q5TEC3 545 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 FAM160B1Q5W0V3 765 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 MIS18BP1Q6P0N0 1132 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 DEFB123Q8N688 67 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 TBCKQ8TEA7 893 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 LMBR1Q8WVP7 490 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 ZSCAN31Q96LW9 406 aaPredicted RBP22.55■■□□□ 1.2
SFXN1-209ENST00000508290 RIT2Q99578 217 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 NAP1L4Q99733 375 aaKnown RBP22.55■■□□□ 1.2
SFXN1-209ENST00000508290 TANC1Q9C0D5 1861 aa22.55■■□□□ 1.2
SFXN1-209ENST00000508290 CYP3A7-CYP3A51PA0A087WV96 503 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 IGKV6D-21A0A0A0MT36 114 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 DHX15O43143 795 aaKnown RBP22.54■■□□□ 1.2
SFXN1-209ENST00000508290 EFCAB14O75071 495 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 CTDNEP1O95476 244 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 CXCL10P02778 98 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 CYP3A7P24462 503 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 ADAM17P78536 824 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 NPY5RQ15761 445 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 RAB30Q15771 203 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 OTOP2Q7RTS6 562 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 RPAINQ86UA6 219 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 FTOQ9C0B1 505 aaKnown RBP eCLIP22.54■■□□□ 1.2
SFXN1-209ENST00000508290 SH2B1Q9NRF2 756 aaPredicted RBP22.54■■□□□ 1.2
SFXN1-209ENST00000508290 SETD4Q9NVD3 440 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 SLC4A7Q9Y6M7 1214 aa22.54■■□□□ 1.2
SFXN1-209ENST00000508290 CCDC194A0A1B0GVG4 234 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 ADAMTS3O15072 1205 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 TREHO43280 583 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 Q4G0T1 1027 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 ABHD15Q6UXT9 468 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 DEFB128Q7Z7B8 93 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 RSPH3Q86UC2 560 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 NECAB1Q8N987 351 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 PHOSPHO2Q8TCD6 241 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 LENG9Q96B70 501 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 AIFM3Q96NN9 605 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 LLPHQ9BRT6 129 aaKnown RBP22.53■■□□□ 1.2
SFXN1-209ENST00000508290 TELO2Q9Y4R8 837 aa22.53■■□□□ 1.2
SFXN1-209ENST00000508290 RSPH10B2B2RC85 870 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms