RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CCDC66A2RUB6 948 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 MAP2K7O14733 419 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
DDX41-208ENST00000507955 PRPF6O94906 941 aaKnown RBP16.03■□□□□ 0.16
DDX41-208ENST00000507955 FKBP3Q00688 224 aaKnown RBP16.03■□□□□ 0.16
DDX41-208ENST00000507955 GIT2Q14161 759 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 TAF3Q5VWG9 929 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 SLFN12Q8IYM2 578 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 TTLL6Q8N841 843 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 COL4A3BPQ9Y5P4 624 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 MYBP10242 640 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 ARID5AQ03989 594 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
DDX41-208ENST00000507955 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 RETREG2Q8NC44 543 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 RUSC1Q9BVN2 902 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 LRRC27Q9C0I9 530 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 KCTD10Q9H3F6 313 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 HAUS4Q9H6D7 363 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 MLXIPQ9HAP2 919 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 PLAGL2Q9UPG8 496 aa16.03■□□□□ 0.16
DDX41-208ENST00000507955 KCNA3P22001 575 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 HMGB2P26583 209 aaKnown RBP16.02■□□□□ 0.16
DDX41-208ENST00000507955 HOXD13P35453 343 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 CYLC1P35663 651 aaPredicted RBP16.02■□□□□ 0.16
DDX41-208ENST00000507955 HNRNPH2P55795 449 aaKnown RBP16.02■□□□□ 0.16
DDX41-208ENST00000507955 ADAM9Q13443 819 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 POTEAQ6S8J7 498 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 KSR1Q8IVT5 923 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 BAP1Q92560 729 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 GLT8D2Q9H1C3 349 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 PKD2L1Q9P0L9 805 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 VAV3Q9UKW4 847 aa16.02■□□□□ 0.16
DDX41-208ENST00000507955 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.15
DDX41-208ENST00000507955 BRD3Q15059 726 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 Q4G0T1 1027 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 BTNL9Q6UXG8 535 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 CEP112Q8N8E3 955 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 PSMB7Q99436 277 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 GMLQ99445 158 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.15
DDX41-208ENST00000507955 RAB21Q9UL25 225 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 DNM3Q9UQ16 869 aa16.02■□□□□ 0.15
DDX41-208ENST00000507955 IGLV3-22A0A075B6J6 115 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 EIF3CLB5ME19 914 aaKnown RBP16.01■□□□□ 0.15
DDX41-208ENST00000507955 NOL4O94818 638 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 EGFRP00533 1210 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 RPA1P27694 616 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 KRT83P78385 493 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 CACNA2D4Q7Z3S7 1137 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 TPH2Q8IWU9 490 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 MMS19Q96T76 1030 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 EIF3CQ99613 913 aaKnown RBP16.01■□□□□ 0.15
DDX41-208ENST00000507955 EIF2AK1Q9BQI3 630 aaKnown RBP16.01■□□□□ 0.15
DDX41-208ENST00000507955 TMX2Q9Y320 296 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 A0A1W2PQJ5 194 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 FAM170AA1A519 330 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 KIF11P52732 1056 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 TRMT1LQ7Z2T5 733 aaKnown RBP16.01■□□□□ 0.15
DDX41-208ENST00000507955 FAM151AQ8WW52 585 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 DEF6Q9H4E7 631 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 ARHGEF10LQ9HCE6 1279 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 HERC5Q9UII4 1024 aaKnown RBP16.01■□□□□ 0.15
DDX41-208ENST00000507955 SALL4Q9UJQ4 1053 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 CAPN6Q9Y6Q1 641 aa16.01■□□□□ 0.15
DDX41-208ENST00000507955 CLIC2O15247 247 aa16■□□□□ 0.15
DDX41-208ENST00000507955 KRT86O43790 486 aa16■□□□□ 0.15
DDX41-208ENST00000507955 IPO7O95373 1038 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 ACTN1P12814 892 aa16■□□□□ 0.15
DDX41-208ENST00000507955 POLR2FP61218 127 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 VSNL1P62760 191 aa16■□□□□ 0.15
DDX41-208ENST00000507955 FIGNQ5HY92 759 aa16■□□□□ 0.15
DDX41-208ENST00000507955 HAUS3Q68CZ6 603 aa16■□□□□ 0.15
DDX41-208ENST00000507955 DNAAF5Q86Y56 855 aa16■□□□□ 0.15
DDX41-208ENST00000507955 NAP1L4Q99733 375 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 ABCB6Q9NP58 842 aa16■□□□□ 0.15
DDX41-208ENST00000507955 DDX39AO00148 427 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 AKR1B10O60218 316 aa16■□□□□ 0.15
DDX41-208ENST00000507955 TLR2O60603 784 aa16■□□□□ 0.15
DDX41-208ENST00000507955 MOCS3O95396 460 aa16■□□□□ 0.15
DDX41-208ENST00000507955 FGFR1OPO95684 399 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 NR2F2P24468 414 aa16■□□□□ 0.15
DDX41-208ENST00000507955 MMP14P50281 582 aa16■□□□□ 0.15
DDX41-208ENST00000507955 TRAPPC11Q7Z392 1133 aa16■□□□□ 0.15
DDX41-208ENST00000507955 SYT2Q8N9I0 419 aaPredicted RBP16■□□□□ 0.15
DDX41-208ENST00000507955 SUPT20HQ8NEM7 779 aa16■□□□□ 0.15
DDX41-208ENST00000507955 AGBL1Q96MI9 1066 aa16■□□□□ 0.15
DDX41-208ENST00000507955 LSM14BQ9BX40 385 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 IFIH1Q9BYX4 1025 aaKnown RBP16■□□□□ 0.15
DDX41-208ENST00000507955 WRAP73Q9P2S5 460 aaPredicted RBP16■□□□□ 0.15
DDX41-208ENST00000507955 PCDHA13Q9Y5I0 950 aa16■□□□□ 0.15
DDX41-208ENST00000507955 CTAGE15A4D2H0 777 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 N4BP1O75113 896 aaKnown RBP15.99■□□□□ 0.15
DDX41-208ENST00000507955 CTAGE8P0CG41 777 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms