RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 ME3Q16798 604 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 FAM160B1Q5W0V3 765 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 GPR153Q6NV75 609 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 DAGLBQ8NCG7 672 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 BCAS3Q9H6U6 928 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 DDX39AO00148 427 aaKnown RBP17.74■□□□□ 0.43
COL1A1-211ENST00000507689 BACH1O14867 736 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 SELPP16109 830 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 ACTR2P61160 394 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 RABEP1Q15276 862 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 MIS18BP1Q6P0N0 1132 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 ZNF365Q70YC5 407 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 DEFB128Q7Z7B8 93 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 TRIM50Q86XT4 487 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 TBCKQ8TEA7 893 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 SCLYQ96I15 445 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 NAP1L4Q99733 375 aaKnown RBP17.74■□□□□ 0.43
COL1A1-211ENST00000507689 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL1A1-211ENST00000507689 SH2B1Q9NRF2 756 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-211ENST00000507689 SAMM50Q9Y512 469 aa17.74■□□□□ 0.43
COL1A1-211ENST00000507689 UMODL1Q5DID0 1318 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 NRCAMQ92823 1304 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 DNAH12Q6ZR08 3092 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 TRIOBPQ9H2D6 2365 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.73■□□□□ 0.43
COL1A1-211ENST00000507689 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.73■□□□□ 0.43
COL1A1-211ENST00000507689 ZBBXA8MT70 800 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 FAM86B1E9PN63 330 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 FAM86B2P0C5J1 330 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 IQCF3P0C7M6 154 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 MARK3P27448 753 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 EPHB4P54760 987 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 PPFIA1Q13136 1202 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 TMEM240Q5SV17 173 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 LRRC8DQ7L1W4 858 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 RSPH3Q86UC2 560 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 LRCH3Q96II8 777 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 KCNJ14Q9UNX9 436 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 TRPC6Q9Y210 931 aa17.73■□□□□ 0.43
COL1A1-211ENST00000507689 EMSYQ7Z589 1322 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 GSTTP1A0A1W2PQM5 241 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 MARCH6O60337 910 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 CIITAP33076 1130 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 KRT2P35908 639 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 THPOP40225 353 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 RBM25P49756 843 aaKnown RBP17.72■□□□□ 0.43
COL1A1-211ENST00000507689 SLC26A2P50443 739 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 STAT5BP51692 787 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 SMAD3P84022 425 aaKnown RBP17.72■□□□□ 0.43
COL1A1-211ENST00000507689 KRT76Q01546 638 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 SAFBQ15424 915 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL1A1-211ENST00000507689 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 AIFM3Q96NN9 605 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 PHF20Q9BVI0 1012 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 SETD4Q9NVD3 440 aa17.72■□□□□ 0.43
COL1A1-211ENST00000507689 RRN3P2A6NIE6 340 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 SOX1O00570 391 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-211ENST00000507689 SLC34A2O95436 690 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 RPLP2P05387 115 aaKnown RBP17.71■□□□□ 0.43
COL1A1-211ENST00000507689 PSAPP07602 524 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 CKBP12277 381 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 ITGB3BPQ13352 177 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-211ENST00000507689 ZNF697Q5TEC3 545 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 ZNF746Q6NUN9 644 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-211ENST00000507689 OTOP2Q7RTS6 562 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 PLPPR4Q7Z2D5 763 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-211ENST00000507689 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 HERVK_113Q902F9 699 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 SLC4A7Q9Y6M7 1214 aa17.71■□□□□ 0.43
COL1A1-211ENST00000507689 IGLV3-22A0A075B6J6 115 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 GAS7O60861 476 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 CAND2O75155 1236 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 HMGN5P82970 282 aaKnown RBP17.7■□□□□ 0.42
COL1A1-211ENST00000507689 ZNF200P98182 395 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-211ENST00000507689 TAF2Q6P1X5 1199 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 SERINC5Q86VE9 423 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 DEFB123Q8N688 67 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 CRYGNQ8WXF5 182 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
COL1A1-211ENST00000507689 TEKT3Q9BXF9 490 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 ZNF302Q9NR11 478 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
COL1A1-211ENST00000507689 RSPH10B2B2RC85 870 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 TREHO43280 583 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 LGR5O75473 907 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 LARGE1O95461 756 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 CTDNEP1O95476 244 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 RSPH10BP0C881 870 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 GCFC2P16383 781 aaKnown RBP17.69■□□□□ 0.42
COL1A1-211ENST00000507689 KCNJ6P48051 423 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 IGBP1P78318 339 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 RBL2Q08999 1139 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 GNL2Q13823 731 aaKnown RBP17.69■□□□□ 0.42
COL1A1-211ENST00000507689 GRIK4Q16099 956 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 INF2Q27J81 1249 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 LETM2Q2VYF4 491 aa17.69■□□□□ 0.42
COL1A1-211ENST00000507689 LRCH2Q5VUJ6 765 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms