RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 FAM83BQ5T0W9 1011 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 LENG9Q96B70 501 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 GMCL1Q96IK5 515 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 DNM3Q9UQ16 869 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 PCDHA2Q9Y5H9 948 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.33■■□□□ 1.49
SPCS3-203ENST00000507678 CAPN6Q9Y6Q1 641 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 CYP3A7-CYP3A51PA0A087WV96 503 aa24.33■■□□□ 1.48
SPCS3-203ENST00000507678 RSPH10B2B2RC85 870 aa24.33■■□□□ 1.48
SPCS3-203ENST00000507678 MSH4O15457 936 aa24.33■■□□□ 1.48
SPCS3-203ENST00000507678 RSPH10BP0C881 870 aa24.33■■□□□ 1.48
SPCS3-203ENST00000507678 CYP3A7P24462 503 aa24.33■■□□□ 1.48
SPCS3-203ENST00000507678 POLR2FP61218 127 aaKnown RBP24.33■■□□□ 1.48
SPCS3-203ENST00000507678 SMC1AQ14683 1233 aaKnown RBP24.33■■□□□ 1.48
SPCS3-203ENST00000507678 MIGA2Q7L4E1 593 aa24.33■■□□□ 1.48
SPCS3-203ENST00000507678 SFI1A8K8P3 1242 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 CAPN2P17655 700 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
SPCS3-203ENST00000507678 OAS2P29728 719 aaKnown RBP24.32■■□□□ 1.48
SPCS3-203ENST00000507678 BRD3Q15059 726 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 SFR1Q86XK3 245 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 EHBP1Q8NDI1 1231 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 ERMNQ8TAM6 284 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 BAP1Q92560 729 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 REEP2Q9BRK0 252 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 BHMT2Q9H2M3 363 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 TMOD2Q9NZR1 351 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 ZMYND10O75800 440 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 SPATA31C1P0DKV0 1188 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 PIGOQ8TEQ8 1089 aa24.32■■□□□ 1.48
SPCS3-203ENST00000507678 FKBP1AP62942 108 aaKnown RBP24.31■■□□□ 1.48
SPCS3-203ENST00000507678 PDGFDQ9GZP0 370 aaPredicted RBP24.31■■□□□ 1.48
SPCS3-203ENST00000507678 USO1O60763 962 aaKnown RBP24.31■■□□□ 1.48
SPCS3-203ENST00000507678 PRPF6O94906 941 aaKnown RBP24.31■■□□□ 1.48
SPCS3-203ENST00000507678 NR2F2P24468 414 aa24.31■■□□□ 1.48
SPCS3-203ENST00000507678 SREBF1P36956 1147 aa24.31■■□□□ 1.48
SPCS3-203ENST00000507678 STAT2P52630 851 aa24.31■■□□□ 1.48
SPCS3-203ENST00000507678 GYS2P54840 703 aa24.31■■□□□ 1.48
SPCS3-203ENST00000507678 NAP1L1P55209 391 aaKnown RBP24.31■■□□□ 1.48
SPCS3-203ENST00000507678 MSANTD4Q8NCY6 345 aa24.31■■□□□ 1.48
SPCS3-203ENST00000507678 CRYGNQ8WXF5 182 aa24.31■■□□□ 1.48
SPCS3-203ENST00000507678 KCTD10Q9H3F6 313 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 EML1O00423 815 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 ENTPD3O75355 529 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 MYBP10242 640 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 CXCR5P32302 372 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 RASSF7Q02833 373 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 GIT2Q14161 759 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 CTTNQ14247 550 aaKnown RBP24.3■■□□□ 1.48
SPCS3-203ENST00000507678 BEND6Q5SZJ8 279 aaPredicted RBP24.3■■□□□ 1.48
SPCS3-203ENST00000507678 PDXDC1Q6P996 788 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 C7orf43Q8WVR3 580 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 MBOAT7Q96N66 472 aa24.3■■□□□ 1.48
SPCS3-203ENST00000507678 BUB1O43683 1085 aa24.29■■□□□ 1.48
SPCS3-203ENST00000507678 MAGEA1P43355 309 aa24.29■■□□□ 1.48
SPCS3-203ENST00000507678 DNA2P51530 1060 aa24.29■■□□□ 1.48
SPCS3-203ENST00000507678 POTEB2H3BUK9 544 aa24.29■■□□□ 1.48
SPCS3-203ENST00000507678 ZBTB39O15060 712 aa24.29■■□□□ 1.48
SPCS3-203ENST00000507678 CDK17Q00537 523 aa24.29■■□□□ 1.48
SPCS3-203ENST00000507678 PAPD7Q5XG87 772 aaKnown RBP24.29■■□□□ 1.48
SPCS3-203ENST00000507678 ZNF277Q9NRM2 450 aaPredicted RBP24.29■■□□□ 1.48
SPCS3-203ENST00000507678 ABCB11O95342 1321 aa24.29■■□□□ 1.48
SPCS3-203ENST00000507678 ERLIN1O75477 346 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 RPA1P27694 616 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 RAPGEF1Q13905 1077 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 Q4G0T1 1027 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 PDE2AO00408 941 aaPredicted RBP24.28■■□□□ 1.48
SPCS3-203ENST00000507678 FOSP01100 380 aaPredicted RBP24.28■■□□□ 1.48
SPCS3-203ENST00000507678 HNRNPH3P31942 346 aaKnown RBP24.28■■□□□ 1.48
SPCS3-203ENST00000507678 MRPS25P82663 173 aaKnown RBP24.28■■□□□ 1.48
SPCS3-203ENST00000507678 TPH2Q8IWU9 490 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 GDAP1L1Q96MZ0 367 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.28■■□□□ 1.48
SPCS3-203ENST00000507678 RUSC1Q9BVN2 902 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 IKZF4Q9H2S9 585 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 SH2D4AQ9H788 454 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 RAB21Q9UL25 225 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 NOL4O94818 638 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 C2orf54Q08AI8 447 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 DLGAP5Q15398 846 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 EZH2Q15910 746 aaKnown RBP24.28■■□□□ 1.48
SPCS3-203ENST00000507678 EIF2AK1Q9BQI3 630 aaKnown RBP24.28■■□□□ 1.48
SPCS3-203ENST00000507678 TSGA10Q9BZW7 698 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 TMEM39BQ9GZU3 492 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 ARHGEF10LQ9HCE6 1279 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 SMARCAL1Q9NZC9 954 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 SALL4Q9UJQ4 1053 aa24.28■■□□□ 1.48
SPCS3-203ENST00000507678 CETN3O15182 167 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 ATP8B1O43520 1251 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 TACC1O75410 805 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 ACTN1P12814 892 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
SPCS3-203ENST00000507678 KCNA1Q09470 495 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 DCAF17Q5H9S7 520 aaPredicted RBP24.27■■□□□ 1.48
SPCS3-203ENST00000507678 TCERG1LQ5VWI1 586 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 TRIM59Q8IWR1 403 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 PDE11AQ9HCR9 933 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 SPDYE2BA6NHP3 402 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 CLIC2O15247 247 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 NCK2O43639 380 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms