RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SEPT1Q8WYJ6 367 aa22.53■■□□□ 1.2
SNX25-204ENST00000506896 KAT2BQ92831 832 aa22.53■■□□□ 1.2
SNX25-204ENST00000506896 ZNF577Q9BSK1 485 aa22.53■■□□□ 1.2
SNX25-204ENST00000506896 TBC1D22BQ9NU19 505 aa22.53■■□□□ 1.2
SNX25-204ENST00000506896 BTBD18B2RXH4 712 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 EDIL3O43854 480 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 LGALS2P05162 132 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 ZNF286BP0CG31 522 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 SP4Q02446 784 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 FPGSQ05932 587 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 ITGB3BPQ13352 177 aaPredicted RBP22.52■■□□□ 1.2
SNX25-204ENST00000506896 Q4G0T1 1027 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 LENG9Q96B70 501 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 MBOAT7Q96N66 472 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 SMC3Q9UQE7 1217 aa22.52■■□□□ 1.2
SNX25-204ENST00000506896 DOCK5Q9H7D0 1870 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 TCF7P36402 384 aaPredicted RBP22.51■■□□□ 1.19
SNX25-204ENST00000506896 CUL4AQ13619 759 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 MFSD10Q14728 455 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 LETM2Q2VYF4 491 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 PPP4R3AQ6IN85 833 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 SESTD1Q86VW0 696 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 SNX21Q969T3 373 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 C16orf70Q9BSU1 422 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 FOXP1Q9H334 677 aaPredicted RBP22.51■■□□□ 1.19
SNX25-204ENST00000506896 TCEAL9Q9UHQ7 104 aa22.51■■□□□ 1.19
SNX25-204ENST00000506896 ZNF215Q9UL58 517 aaPredicted RBP22.51■■□□□ 1.19
SNX25-204ENST00000506896 H3BRB1 525 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 HAS3O00219 553 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 SUPT20HL2P0C7V6 817 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 CYP2C18P33260 490 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 PSEN2P49810 448 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 GUCY1B3Q02153 619 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 KIAA0753Q2KHM9 967 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 FAM47CQ5HY64 1035 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 C16orf59Q7L2K0 433 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 NOC4LQ9BVI4 516 aaKnown RBP22.5■■□□□ 1.19
SNX25-204ENST00000506896 PPP1R12CQ9BZL4 782 aa22.5■■□□□ 1.19
SNX25-204ENST00000506896 TUT1Q9H6E5 874 aaKnown RBP22.5■■□□□ 1.19
SNX25-204ENST00000506896 TRMT13Q9NUP7 481 aaKnown RBP22.5■■□□□ 1.19
SNX25-204ENST00000506896 DDX25Q9UHL0 483 aaKnown RBP22.5■■□□□ 1.19
SNX25-204ENST00000506896 GSTTP1A0A1W2PQM5 241 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 K7ELQ4 463 aaPredicted RBP22.49■■□□□ 1.19
SNX25-204ENST00000506896 DHX15O43143 795 aaKnown RBP22.49■■□□□ 1.19
SNX25-204ENST00000506896 TDP2O95551 362 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 GJB2P29033 226 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 CHMP4BP1P59074 171 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 ACTR2P61160 394 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 GNL2Q13823 731 aaKnown RBP22.49■■□□□ 1.19
SNX25-204ENST00000506896 C7orf31Q8N865 590 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 PPP1R13LQ8WUF5 828 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 RIT2Q99578 217 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 HIPK3Q9H422 1215 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 UMODL1Q5DID0 1318 aa22.49■■□□□ 1.19
SNX25-204ENST00000506896 MSH4O15457 936 aa22.48■■□□□ 1.19
SNX25-204ENST00000506896 CCNT1O60563 726 aaKnown RBP22.48■■□□□ 1.19
SNX25-204ENST00000506896 CSF2RAP15509 400 aa22.48■■□□□ 1.19
SNX25-204ENST00000506896 KRT76Q01546 638 aa22.48■■□□□ 1.19
SNX25-204ENST00000506896 PPIGQ13427 754 aaKnown RBP eCLIP22.48■■□□□ 1.19
SNX25-204ENST00000506896 EARS2Q5JPH6 523 aaKnown RBP22.48■■□□□ 1.19
SNX25-204ENST00000506896 ZNF746Q6NUN9 644 aaPredicted RBP22.48■■□□□ 1.19
SNX25-204ENST00000506896 SMAP1Q8IYB5 467 aaPredicted RBP22.48■■□□□ 1.19
SNX25-204ENST00000506896 TMEM199Q8N511 208 aa22.48■■□□□ 1.19
SNX25-204ENST00000506896 SMARCAD1Q9H4L7 1026 aa22.48■■□□□ 1.19
SNX25-204ENST00000506896 EMSYQ7Z589 1322 aa22.48■■□□□ 1.19
SNX25-204ENST00000506896 TRIP12Q14669 1992 aaPredicted RBP22.47■■□□□ 1.19
SNX25-204ENST00000506896 ATG7O95352 703 aa22.47■■□□□ 1.19
SNX25-204ENST00000506896 TMEM240Q5SV17 173 aa22.47■■□□□ 1.19
SNX25-204ENST00000506896 UTP14CQ5TAP6 766 aaKnown RBP22.47■■□□□ 1.19
SNX25-204ENST00000506896 SLC5A5Q92911 643 aa22.47■■□□□ 1.19
SNX25-204ENST00000506896 INTS4Q96HW7 963 aaKnown RBP22.47■■□□□ 1.19
SNX25-204ENST00000506896 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.47■■□□□ 1.191e-8■□□□□ 10.6
SNX25-204ENST00000506896 AZI2Q9H6S1 392 aa22.47■■□□□ 1.19
SNX25-204ENST00000506896 ERAP1Q9NZ08 941 aa22.47■■□□□ 1.19
SNX25-204ENST00000506896 GTF2IRD1Q9UHL9 959 aa22.47■■□□□ 1.19
SNX25-204ENST00000506896 TELO2Q9Y4R8 837 aa22.47■■□□□ 1.19
SNX25-204ENST00000506896 DDX39AO00148 427 aaKnown RBP22.46■■□□□ 1.19
SNX25-204ENST00000506896 TBX3O15119 743 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 GAS7O60861 476 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 LGR5O75473 907 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 CYP2C9P11712 490 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 LRCH2Q5VUJ6 765 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 MIS18BP1Q6P0N0 1132 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 ETNPPLQ8TBG4 499 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 GLG1Q92896 1179 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 FAM20AQ96MK3 541 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 CTAGE1Q96RT6 745 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 WNT8AQ9H1J5 351 aa22.46■■□□□ 1.19
SNX25-204ENST00000506896 FAM205CA6NFA0 338 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 CCNE2O96020 404 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 U2AF2P26368 475 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNX25-204ENST00000506896 PLPPR4Q7Z2D5 763 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 TRIM50Q86XT4 487 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 NOSTRINQ8IVI9 506 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 HSCBQ8IWL3 235 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 TNPO1Q92973 898 aaKnown RBP22.45■■□□□ 1.18
SNX25-204ENST00000506896 VWCEQ96DN2 955 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 TEKT3Q9BXF9 490 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 IL23AQ9NPF7 189 aa22.45■■□□□ 1.18
SNX25-204ENST00000506896 HDAC6Q9UBN7 1215 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms