RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 E7EWF7 191 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 KCNA5P22460 613 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 COL19A1Q14993 1142 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 NLRX1Q86UT6 975 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 GJD3Q8N144 294 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 IGDCC4Q8TDY8 1250 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 CUL5Q93034 780 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 BACH2Q9BYV9 841 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 CD320Q9NPF0 282 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 SETD4Q9NVD3 440 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.33
CCHCR1-220ENST00000506831 SLC27A2O14975 620 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 NCK2O43639 380 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 RB1P06400 928 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 GPM6BQ13491 265 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 CREB3L3Q68CJ9 461 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 PTCRAQ6ISU1 281 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 TAF2Q6P1X5 1199 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 TMEM192Q8IY95 271 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 LMBR1Q8WVP7 490 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 CDHR1Q96JP9 859 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 LZTS2Q9BRK4 669 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 SENP2Q9HC62 589 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 RTEL1Q9NZ71 1219 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 FAM50BQ9Y247 325 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 RWDD3Q9Y3V2 267 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 NLRC5Q86WI3 1866 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 DOCK5Q9H7D0 1870 aa13.01□□□□□ -0.33
CCHCR1-220ENST00000506831 C5orf67F2Z3F1 127 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 MEIS2O14770 477 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 DDAH1O94760 285 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 RPLP2P05387 115 aaKnown RBP13□□□□□ -0.33
CCHCR1-220ENST00000506831 CTSHP09668 335 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 ALADP13716 330 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 IL9P15248 144 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 KIF5BP33176 963 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 GNAQP50148 359 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 ARHGAP4P98171 946 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 TMTC2Q8N394 836 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 CTCFLQ8NI51 663 aaPredicted RBP13□□□□□ -0.33
CCHCR1-220ENST00000506831 GPRASP2Q96D09 838 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
CCHCR1-220ENST00000506831 IL17RAQ96F46 866 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 OSBPL7Q9BZF2 842 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 LMAN2LQ9H0V9 348 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 NSUN3Q9H649 340 aaKnown RBP13□□□□□ -0.33
CCHCR1-220ENST00000506831 EHMT1Q9H9B1 1298 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 TTC3P53804 2025 aa13□□□□□ -0.33
CCHCR1-220ENST00000506831 PRR33A8MZF0 331 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 MAFGO15525 162 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 UPP2O95045 317 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 CHRNA1P02708 482 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 HSPA4P34932 840 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 ANTXR2P58335 489 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 RNF20Q5VTR2 975 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 USP17L6PQ6QN14 398 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 RSPH3Q86UC2 560 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 TRIM50Q86XT4 487 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 MB21D2Q8IYB1 491 aaPredicted RBP12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 FIBCD1Q8N539 461 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 SEPT1Q8WYJ6 367 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 TAF6LQ9Y6J9 622 aa12.99□□□□□ -0.33
CCHCR1-220ENST00000506831 MBLAC1A4D2B0 266 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 TCF7P36402 384 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 MGAT3Q09327 533 aa12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 TCEAL5Q5H9L2 206 aa12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 FAM43BQ6ZT52 329 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 ZNF654Q8IZM8 581 aa12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 CLP1Q92989 425 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 C11orf84Q9BUA3 381 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 LY9Q9HBG7 655 aa12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 ERAP1Q9NZ08 941 aa12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 SQORQ9Y6N5 450 aa12.98□□□□□ -0.33
CCHCR1-220ENST00000506831 LINC00271P0C7V0 271 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 KCNA2P16389 499 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 BMPR1AP36894 532 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 CTC1Q2NKJ3 1217 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 TEX2Q8IWB9 1127 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 PIBF1Q8WXW3 757 aa12.97□□□□□ -0.33
CCHCR1-220ENST00000506831 KCNB2Q92953 911 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms