RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ELP1O95163 1332 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 IGKV6D-21A0A0A0MT36 114 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 DDX39AO00148 427 aaKnown RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 NOP56O00567 594 aaKnown RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 OR52Z1P0C646 297 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 PRPHP41219 470 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 NUCB2P80303 420 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 ATP2C1P98194 919 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 PURAQ00577 322 aaKnown RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 PPP2R5CQ13362 524 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 SF3A1Q15459 793 aaKnown RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 ABHD15Q6UXT9 468 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 SMAP1Q8IYB5 467 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 C16orf70Q9BSU1 422 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 UNC45AQ9H3U1 944 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 TTC12Q9H892 705 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 CIZ1Q9ULV3 898 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 PCDHA12Q9UN75 941 aa14.5□□□□□ -0.09
TCOF1-210ENST00000506767 KIAA0100Q14667 2235 aaKnown RBP14.5□□□□□ -0.09
TCOF1-210ENST00000506767 MARCH6O60337 910 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 LGR5O75473 907 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 CABYRO75952 493 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-210ENST00000506767 TCF7P36402 384 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-210ENST00000506767 TXKP42681 527 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 SP4Q02446 784 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 PTPAQ15257 358 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 RDM1Q8NG50 284 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 DIS3LQ8TF46 1054 aaKnown RBP14.49□□□□□ -0.09
TCOF1-210ENST00000506767 KAT2BQ92831 832 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 USP28Q96RU2 1077 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 PCYT2Q99447 389 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 FTOQ9C0B1 505 aaKnown RBP eCLIP14.49□□□□□ -0.09
TCOF1-210ENST00000506767 PCDHA10Q9Y5I2 948 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 CLIC4Q9Y696 253 aa14.49□□□□□ -0.09
TCOF1-210ENST00000506767 MORC2Q9Y6X9 1032 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-210ENST00000506767 EMSYQ7Z589 1322 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 TNRC18O15417 2968 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-210ENST00000506767 A0A1W2PQ45 241 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-210ENST00000506767 A0A1W2PQY0 241 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 WDR64B1ANS9 1081 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 HAS3O00219 553 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 EML1O00423 815 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 BMP15O95972 392 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 F2P00734 622 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 LGALS2P05162 132 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 MYL3P08590 195 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 SUPT20HL2P0C7V6 817 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 SFNP31947 248 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 NASPP49321 788 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-210ENST00000506767 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.091e-6■■■■□ 21.2
TCOF1-210ENST00000506767 JAK3P52333 1124 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 IL17AQ16552 155 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 ARL6IP4Q66PJ3 421 aaKnown RBP14.48□□□□□ -0.09
TCOF1-210ENST00000506767 ATL3Q6DD88 541 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 CXCL17Q6UXB2 119 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 AFAP1L1Q8TED9 768 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 PAWRQ96IZ0 340 aaKnown RBP14.48□□□□□ -0.09
TCOF1-210ENST00000506767 ZNF396Q96N95 335 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-210ENST00000506767 MTG1Q9BT17 334 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-210ENST00000506767 DISC1Q9NRI5 854 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 CEP131Q9UPN4 1083 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 WDR81Q562E7 1941 aa14.48□□□□□ -0.09
TCOF1-210ENST00000506767 SCN10AQ9Y5Y9 1956 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 PDIA5Q14554 519 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 MIS18BP1Q6P0N0 1132 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 PLPPR4Q7Z2D5 763 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 MIER3Q7Z3K6 550 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 NECAB2Q7Z6G3 386 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 FERMT2Q96AC1 680 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 GLT1D1Q96MS3 346 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 C11orf49Q9H6J7 331 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 TFIP11Q9UBB9 837 aaKnown RBP14.47□□□□□ -0.09
TCOF1-210ENST00000506767 TCEAL9Q9UHQ7 104 aa14.47□□□□□ -0.09
TCOF1-210ENST00000506767 MAFBQ9Y5Q3 323 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-210ENST00000506767 GRIN2DO15399 1336 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 H3BRB1 525 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 CHMP2AO43633 222 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 PSAPP07602 524 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 ZNF286BP0CG31 522 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 TECP42680 631 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 SLC39A14Q15043 492 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 EPHA7Q15375 998 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 UTP14CQ5TAP6 766 aaKnown RBP14.46□□□□□ -0.09
TCOF1-210ENST00000506767 C1orf53Q5VUE5 145 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 SWSAP1Q6NVH7 229 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 TRIM50Q86XT4 487 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 CCDC60Q8IWA6 550 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-210ENST00000506767 IGSF22Q8N9C0 903 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 SLC43A3Q8NBI5 491 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 LINC00301Q8NCQ3 95 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 KATNAL1Q9BW62 490 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 SENP6Q9GZR1 1112 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-210ENST00000506767 SMARCAD1Q9H4L7 1026 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 TUT1Q9H6E5 874 aaKnown RBP14.46□□□□□ -0.09
TCOF1-210ENST00000506767 STARD7Q9NQZ5 370 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 ATP6V1DQ9Y5K8 247 aa14.46□□□□□ -0.09
TCOF1-210ENST00000506767 IGSF9BQ9UPX0 1349 aa14.45□□□□□ -0.1
TCOF1-210ENST00000506767 POTEMA6NI47 508 aa14.45□□□□□ -0.1
TCOF1-210ENST00000506767 YEATS4O95619 227 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms