RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 LENG9Q96B70 501 aa16.74■□□□□ 0.27
DSP-203ENST00000506617 TRIM43Q96BQ3 446 aaPredicted RBP16.74■□□□□ 0.27
DSP-203ENST00000506617 GDF15Q99988 308 aa16.74■□□□□ 0.27
DSP-203ENST00000506617 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
DSP-203ENST00000506617 COLQQ9Y215 455 aaPredicted RBP16.74■□□□□ 0.27
DSP-203ENST00000506617 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
DSP-203ENST00000506617 TRIOBPQ9H2D6 2365 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 LAD1O00515 517 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 TLR3O15455 904 aaKnown RBP16.73■□□□□ 0.27
DSP-203ENST00000506617 BMP15O95972 392 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 TOB1P50616 345 aaPredicted RBP16.73■□□□□ 0.27
DSP-203ENST00000506617 CHMP4BP1P59074 171 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 MDM2Q00987 491 aaPredicted RBP16.73■□□□□ 0.27
DSP-203ENST00000506617 SP4Q02446 784 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 LETM2Q2VYF4 491 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 NBPF20Q3BBV1 942 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 FAM20AQ96MK3 541 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 PRO3102Q9H379 93 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 KCNH7Q9NS40 1196 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 TMEM39AQ9NV64 488 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 ZDHHC9Q9Y397 364 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 TELO2Q9Y4R8 837 aa16.73■□□□□ 0.27
DSP-203ENST00000506617 TRIP12Q14669 1992 aaPredicted RBP16.73■□□□□ 0.27
DSP-203ENST00000506617 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 NOP56O00567 594 aaKnown RBP16.72■□□□□ 0.27
DSP-203ENST00000506617 KIAA0355O15063 1070 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 B4GALT4O60513 344 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 CCNT1O60563 726 aaKnown RBP16.72■□□□□ 0.27
DSP-203ENST00000506617 F2P00734 622 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 CD4P01730 458 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 FAM47CQ5HY64 1035 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 FERMT3Q86UX7 667 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 PLA2G4DQ86XP0 818 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 RIT2Q99578 217 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 GPR20Q99678 358 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 TBC1D22BQ9NU19 505 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 DDX25Q9UHL0 483 aaKnown RBP16.72■□□□□ 0.27
DSP-203ENST00000506617 TBX21Q9UL17 535 aa16.72■□□□□ 0.27
DSP-203ENST00000506617 NFASCO94856 1347 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 PPFIA4O75335 1185 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 LGALS2P05162 132 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 ARP10275 920 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 ITGB8P26012 769 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 PSEN2P49810 448 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 PKP1Q13835 747 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 MFSD10Q14728 455 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 PRR16Q569H4 304 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 NFRKBQ6P4R8 1299 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 SLFN12Q8IYM2 578 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 LBHD1Q9BQE6 289 aaPredicted RBP16.71■□□□□ 0.27
DSP-203ENST00000506617 KATNAL1Q9BW62 490 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 AGO4Q9HCK5 861 aaKnown RBP16.71■□□□□ 0.27
DSP-203ENST00000506617 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.71■□□□□ 0.27
DSP-203ENST00000506617 TRMT13Q9NUP7 481 aaKnown RBP16.71■□□□□ 0.27
DSP-203ENST00000506617 CEP131Q9UPN4 1083 aa16.71■□□□□ 0.27
DSP-203ENST00000506617 TANC1Q9C0D5 1861 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 HAS3O00219 553 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 NEMFO60524 1076 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 TDP2O95551 362 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 RAG1P15918 1043 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 ETNPPLQ8TBG4 499 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 BADQ92934 168 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 ZNF396Q96N95 335 aaPredicted RBP16.7■□□□□ 0.26
DSP-203ENST00000506617 MTMR9Q96QG7 549 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 C16orf70Q9BSU1 422 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 PPP1R12CQ9BZL4 782 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 KAT6AQ92794 2004 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 WDR81Q562E7 1941 aa16.7■□□□□ 0.26
DSP-203ENST00000506617 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
DSP-203ENST00000506617 MSH4O15457 936 aa16.69■□□□□ 0.26
DSP-203ENST00000506617 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
DSP-203ENST00000506617 PRPHP41219 470 aa16.69■□□□□ 0.26
DSP-203ENST00000506617 PTPN11Q06124 597 aaPredicted RBP16.69■□□□□ 0.26
DSP-203ENST00000506617 ITGB3BPQ13352 177 aaPredicted RBP16.69■□□□□ 0.26
DSP-203ENST00000506617 KIAA0753Q2KHM9 967 aa16.69■□□□□ 0.26
DSP-203ENST00000506617 ARL6IP4Q66PJ3 421 aaKnown RBP16.69■□□□□ 0.26
DSP-203ENST00000506617 TRIM50Q86XT4 487 aa16.69■□□□□ 0.26
DSP-203ENST00000506617 C4orf32Q8N8J7 132 aa16.69■□□□□ 0.26
DSP-203ENST00000506617 ZNF577Q9BSK1 485 aa16.69■□□□□ 0.26
DSP-203ENST00000506617 JPH1Q9HDC5 661 aaPredicted RBP16.69■□□□□ 0.26
DSP-203ENST00000506617 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
DSP-203ENST00000506617 DHX15O43143 795 aaKnown RBP16.68■□□□□ 0.26
DSP-203ENST00000506617 SLC37A4O43826 429 aa16.68■□□□□ 0.26
DSP-203ENST00000506617 BMP8BP34820 402 aa16.68■□□□□ 0.26
DSP-203ENST00000506617 TCF7P36402 384 aaPredicted RBP16.68■□□□□ 0.26
DSP-203ENST00000506617 NASPP49321 788 aaPredicted RBP16.68■□□□□ 0.26
DSP-203ENST00000506617 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
DSP-203ENST00000506617 SESTD1Q86VW0 696 aa16.68■□□□□ 0.26
DSP-203ENST00000506617 UIMC1Q96RL1 719 aa16.68■□□□□ 0.26
DSP-203ENST00000506617 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
DSP-203ENST00000506617 UBE2OQ9C0C9 1292 aaKnown RBP16.68■□□□□ 0.26
DSP-203ENST00000506617 HDAC6Q9UBN7 1215 aa16.68■□□□□ 0.26
DSP-203ENST00000506617 SLC9A2Q9UBY0 812 aa16.68■□□□□ 0.26
DSP-203ENST00000506617 GTF2IRD1Q9UHL9 959 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms