RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 UTP14CQ5TAP6 766 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 SEPT1Q8WYJ6 367 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 CTAGE1Q96RT6 745 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 ZNF577Q9BSK1 485 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 BRMS1Q9HCU9 246 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 HDAC6Q9UBN7 1215 aa20.71■□□□□ 0.91
PDLIM7-216ENST00000506537 H3BRB1 525 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 MSH4O15457 936 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 ACTR2P61160 394 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 HIC1Q14526 733 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 Q4G0T1 1027 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 GDF6Q6KF10 455 aaPredicted RBP20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 MOXD1Q6UVY6 613 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 BADQ92934 168 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 GJA10Q969M2 543 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 PCYT2Q99447 389 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 TUT1Q9H6E5 874 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 GTF2IRD1Q9UHL9 959 aa20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 COLQQ9Y215 455 aaPredicted RBP20.7■□□□□ 0.9
PDLIM7-216ENST00000506537 SLC37A4O43826 429 aa20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 CYP2C9P11712 490 aa20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 LETM2Q2VYF4 491 aa20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 NEK8Q86SG6 692 aa20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 FAM184AQ8NB25 1140 aa20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 FBXO18Q8NFZ0 1043 aa20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 NOC4LQ9BVI4 516 aaKnown RBP20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 UMODL1Q5DID0 1318 aa20.69■□□□□ 0.9
PDLIM7-216ENST00000506537 LGR5O75473 907 aa20.68■□□□□ 0.9
PDLIM7-216ENST00000506537 RAG1P15918 1043 aa20.68■□□□□ 0.9
PDLIM7-216ENST00000506537 C7orf31Q8N865 590 aa20.68■□□□□ 0.9
PDLIM7-216ENST00000506537 ETNPPLQ8TBG4 499 aa20.68■□□□□ 0.9
PDLIM7-216ENST00000506537 SLC5A5Q92911 643 aa20.68■□□□□ 0.9
PDLIM7-216ENST00000506537 PPP1R12CQ9BZL4 782 aa20.68■□□□□ 0.9
PDLIM7-216ENST00000506537 EMSYQ7Z589 1322 aa20.68■□□□□ 0.9
PDLIM7-216ENST00000506537 WNT7AO00755 349 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 ATG7O95352 703 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 TIMP1P01033 207 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 SMIM10L2AP0DMW4 78 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 SMIM10L2BP0DMW5 78 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 HOXC8P31273 242 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 ZNF200P98182 395 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 CUL4AQ13619 759 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 PTGISQ16647 500 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 LBHD1Q9BQE6 289 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 HIPK3Q9H422 1215 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 TBC1D22BQ9NU19 505 aa20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 DDX25Q9UHL0 483 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 ZNF215Q9UL58 517 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-216ENST00000506537 GJB2P29033 226 aa20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 CYP2C18P33260 490 aa20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 PPP4R3AQ6IN85 833 aa20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 ABHD15Q6UXT9 468 aa20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 DHX38Q92620 1227 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 WNT8AQ9H1J5 351 aa20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 RNPEPQ9H4A4 650 aa20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 TRIP12Q14669 1992 aaPredicted RBP20.66■□□□□ 0.9
PDLIM7-216ENST00000506537 IGKV6D-21A0A0A0MT36 114 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 KIF28PB7ZC32 967 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 PSMD10O75832 226 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 SUPT20HL2P0C7V6 817 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 GCFC2P16383 781 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 MARK3P27448 753 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 BMP8BP34820 402 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 SAFBQ15424 915 aaKnown RBP eCLIP20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 ZNF746Q6NUN9 644 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 CCDC60Q8IWA6 550 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 GLG1Q92896 1179 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 WNT8BQ93098 351 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 RIT2Q99578 217 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 KCNMB3Q9NPA1 279 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 ERAP1Q9NZ08 941 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 TRIOBPQ9H2D6 2365 aa20.65■□□□□ 0.9
PDLIM7-216ENST00000506537 TANC1Q9C0D5 1861 aa20.64■□□□□ 0.9
PDLIM7-216ENST00000506537 GAS7O60861 476 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 FXR1P51114 621 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 EPHB4P54760 987 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 KRT76Q01546 638 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 LRCH2Q5VUJ6 765 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 MFSD5Q6N075 450 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 POTEDQ86YR6 584 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 UBE2OQ9C0C9 1292 aaKnown RBP20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 FOXP1Q9H334 677 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 UNC45AQ9H3U1 944 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 SMARCAD1Q9H4L7 1026 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 NOD1Q9Y239 953 aa20.64■□□□□ 0.89
PDLIM7-216ENST00000506537 WDR81Q562E7 1941 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 LAMA3Q16787 3333 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 C17orf102A2RUQ5 167 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 ADAM17P78536 824 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 B3GNT9Q6UX72 402 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 HAS1Q92839 578 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 TEKT3Q9BXF9 490 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 AZI2Q9H6S1 392 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 SETD4Q9NVD3 440 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 SMC3Q9UQE7 1217 aa20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-216ENST00000506537 LAMA2P24043 3122 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 CHMP2AO43633 222 aa20.62■□□□□ 0.89
PDLIM7-216ENST00000506537 STAT5BP51692 787 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms