RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 SYMPKQ92797 1274 aaKnown RBP8.1□□□□□ -1.11
NUP54-204ENST00000506098 EMID1Q96A84 441 aaPredicted RBP8.1□□□□□ -1.11
NUP54-204ENST00000506098 EPSTI1Q96J88 318 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 SDF4Q9BRK5 362 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 POLR3CQ9BUI4 534 aaPredicted RBP8.1□□□□□ -1.11
NUP54-204ENST00000506098 UNC45AQ9H3U1 944 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 GOLPH3LQ9H4A5 285 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 BCAS3Q9H6U6 928 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 FAM13BQ9NYF5 915 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 SLC9A2Q9UBY0 812 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 TSKSQ9UJT2 592 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 Q9Y3F1 56 aa8.1□□□□□ -1.11
NUP54-204ENST00000506098 KIAA0100Q14667 2235 aaKnown RBP8.1□□□□□ -1.11
NUP54-204ENST00000506098 HTTP42858 3142 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 KDM3AQ9Y4C1 1321 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 IGKV6D-21A0A0A0MT36 114 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 A0A1B0GVL5 298 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 WDR64B1ANS9 1081 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 FOXN1O15353 648 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 ADCY3O60266 1144 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 GGPS1O95749 300 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 CCNE2O96020 404 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 GH1P01241 217 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 HMGCRP04035 888 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 SPATA31C1P0DKV0 1188 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 HSPA8P11142 646 aaKnown RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 CHRM1P11229 460 aaPredicted RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 PFKFB1P16118 471 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 LIG1P18858 919 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 CDC25AP30304 524 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 CYP2C19P33261 490 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 UBA7P41226 1012 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 ADCYAP1R1P41586 468 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 NDUFA8P51970 172 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 NKX3-2P78367 333 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 FAM160A1Q05DH4 1040 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 ARHGAP1Q07960 439 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 CACNB2Q08289 660 aaPredicted RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 GRB10Q13322 594 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 KLHL40Q2TBA0 621 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 SPECC1Q5M775 1068 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 PRAMEF19Q5SWL8 479 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 MAP3K21Q5TCX8 1036 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 KRT79Q5XKE5 535 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 HAUS3Q68CZ6 603 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 NCAPH2Q6IBW4 605 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 METTL7BQ6UX53 244 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 ABHD15Q6UXT9 468 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 CYFIP1Q7L576 1253 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 CABP7Q86V35 215 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 ELOA2Q8IYF1 753 aaPredicted RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 FSIP1Q8NA03 581 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 SLAIN1Q8ND83 568 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 TRPV1Q8NER1 839 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 ERMNQ8TAM6 284 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 RAET1EQ8TD07 263 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 NEK9Q8TD19 979 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 TIGD1Q96MW7 591 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 UIMC1Q96RL1 719 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 HSD17B14Q9BPX1 270 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 EIF2AK1Q9BQI3 630 aaKnown RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 PYM1Q9BRP8 204 aaKnown RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 TUFT1Q9NNX1 390 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 DISC1Q9NRI5 854 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 CCDC39Q9UFE4 941 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 USP25Q9UHP3 1055 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 KCNH3Q9ULD8 1083 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
NUP54-204ENST00000506098 PCDHA10Q9Y5I2 948 aa8.09□□□□□ -1.11
NUP54-204ENST00000506098 A0A087X0B3 334 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 A0A0U1RQG5 324 aaPredicted RBP8.08□□□□□ -1.12
NUP54-204ENST00000506098 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.08□□□□□ -1.12
NUP54-204ENST00000506098 GSTTP1A0A1W2PQM5 241 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 POTEFA5A3E0 1075 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 PP2D1A8MPX8 630 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 ADCY6O43306 1168 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 MED24O75448 989 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 NR1I2O75469 434 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 SLITRK3O94933 977 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 ZNF202O95125 648 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 LYPLA2O95372 231 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
NUP54-204ENST00000506098 HOXD8P13378 290 aaPredicted RBP8.08□□□□□ -1.12
NUP54-204ENST00000506098 SMPD1P17405 629 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 TXLNAP40222 546 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 SYKP43405 635 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 CTCFP49711 727 aaPredicted RBP8.08□□□□□ -1.12
NUP54-204ENST00000506098 ACTR2P61160 394 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 TNFAIP2Q03169 654 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 LAMC2Q13753 1193 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 E2F4Q16254 413 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 ECM1Q16610 540 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 TMEM119Q4V9L6 283 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 TMEM63BQ5T3F8 832 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 CCDC73Q6ZRK6 1079 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 MIER3Q7Z3K6 550 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 CATSPER3Q86XQ3 398 aa8.08□□□□□ -1.12
NUP54-204ENST00000506098 DHX37Q8IY37 1157 aaKnown RBP8.08□□□□□ -1.12
NUP54-204ENST00000506098 SNX29Q8TEQ0 813 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms