RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 BLIDQ8IZY5 108 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 AIFM3Q96NN9 605 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 CTAGE1Q96RT6 745 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 IL23AQ9NPF7 189 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 SLC9A2Q9UBY0 812 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 TELO2Q9Y4R8 837 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 M0R2N6 131 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 SLC34A2O95436 690 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 SMIM10L2AP0DMW4 78 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 SMIM10L2BP0DMW5 78 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 HOXC8P31273 242 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 RFC2P35250 354 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 DDIT3P35638 169 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 USP11P51784 963 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 RBL2Q08999 1139 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 PTK7Q13308 1070 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 ITGB3BPQ13352 177 aaPredicted RBP12.97□□□□□ -0.33
KDM3B-203ENST00000505756 NPY5RQ15761 445 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 UTP14CQ5TAP6 766 aaKnown RBP12.97□□□□□ -0.33
KDM3B-203ENST00000505756 GPR153Q6NV75 609 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 C16orf59Q7L2K0 433 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
KDM3B-203ENST00000505756 RETREG2Q8NC44 543 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
KDM3B-203ENST00000505756 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
KDM3B-203ENST00000505756 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 ERAP1Q9NZ08 941 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
KDM3B-203ENST00000505756 DOCK5Q9H7D0 1870 aa12.97□□□□□ -0.33
KDM3B-203ENST00000505756 EMSYQ7Z589 1322 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 PFKMP08237 780 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 IQCF3P0C7M6 154 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 GNAT1P11488 350 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 ACTR2P61160 394 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 ST3GAL1Q11201 340 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 TMEM240Q5SV17 173 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 NSUN7Q8NE18 718 aaKnown RBP12.96□□□□□ -0.33
KDM3B-203ENST00000505756 TBCKQ8TEA7 893 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 AFAP1L1Q8TED9 768 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
KDM3B-203ENST00000505756 GLG1Q92896 1179 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 SCLYQ96I15 445 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 ZNF577Q9BSK1 485 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 SMARCAD1Q9H4L7 1026 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
KDM3B-203ENST00000505756 IPO5O00410 1097 aaKnown RBP12.95□□□□□ -0.34
KDM3B-203ENST00000505756 LGR5O75473 907 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 FGBP02675 491 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 ACRP10323 421 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
KDM3B-203ENST00000505756 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
KDM3B-203ENST00000505756 HIC1Q14526 733 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 PRR16Q569H4 304 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 ZNF365Q70YC5 407 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 SERINC5Q86VE9 423 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 ATP6V0A1Q93050 837 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 MTIF3Q9H2K0 278 aaKnown RBP12.95□□□□□ -0.34
KDM3B-203ENST00000505756 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 AZI2Q9H6S1 392 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 TBC1D22BQ9NU19 505 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
KDM3B-203ENST00000505756 NRCAMQ92823 1304 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 DHX15O43143 795 aaKnown RBP12.94□□□□□ -0.34
KDM3B-203ENST00000505756 ATG7O95352 703 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 PARNO95453 639 aaKnown RBP12.94□□□□□ -0.34
KDM3B-203ENST00000505756 CKBP12277 381 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 SELPP16109 830 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 SMAD3P84022 425 aaKnown RBP12.94□□□□□ -0.34
KDM3B-203ENST00000505756 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.34
KDM3B-203ENST00000505756 RASIP1Q5U651 963 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 PLPPR4Q7Z2D5 763 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 HERVK_113Q902F9 699 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 LENG9Q96B70 501 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 SETD4Q9NVD3 440 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 TCEAL9Q9UHQ7 104 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 SZT2Q5T011 3432 aa12.94□□□□□ -0.34
KDM3B-203ENST00000505756 LAMA2P24043 3122 aaKnown RBP12.94□□□□□ -0.34
KDM3B-203ENST00000505756 CYP3A7-CYP3A51PA0A087WV96 503 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 IGKV6D-21A0A0A0MT36 114 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 DDX39AO00148 427 aaKnown RBP12.93□□□□□ -0.34
KDM3B-203ENST00000505756 TREHO43280 583 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 EDIL3O43854 480 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 JAK2O60674 1132 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 DTNBO60941 627 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 CAND2O75155 1236 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 CCNE2O96020 404 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 CYP3A7P24462 503 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 MARK3P27448 753 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 SLC26A2P50443 739 aa12.93□□□□□ -0.34
KDM3B-203ENST00000505756 ADAM17P78536 824 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms