RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 RILPL2Q969X0 211 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 SNX27Q96L92 541 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 CPVLQ9H3G5 476 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 IGFLR1Q9H665 355 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 SETD4Q9NVD3 440 aa11.46□□□□□ -0.57
NEDD9-210ENST00000505589 COL4A4P53420 1690 aaPredicted RBP11.46□□□□□ -0.58
NEDD9-210ENST00000505589 MICAL3Q7RTP6 2002 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 MYH7BA7E2Y1 1941 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 PTPRSQ13332 1948 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 A0A0D9SFI3 127 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 SPATA31C2B4DYI2 1134 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 ENPP3O14638 875 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 MAFGO15525 162 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 CTSHP09668 335 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 ARHGAP4P98171 946 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 HYAL1Q12794 435 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 ODR4Q5SWX8 454 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 CYFIP1Q7L576 1253 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 ENAHQ8N8S7 591 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-210ENST00000505589 CUL5Q93034 780 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 MTMR8Q96EF0 704 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 DSCC1Q9BVC3 393 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 AAASQ9NRG9 546 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 MUTYHQ9UIF7 546 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 PCDHB15Q9Y5E8 787 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 COL4A6Q14031 1691 aa11.45□□□□□ -0.58
NEDD9-210ENST00000505589 SALL3Q9BXA9 1300 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 PNMA6FA0A0J9YX94 578 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 TMEM221A6NGB7 291 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 RRN3P2A6NIE6 340 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 M0QZ92 97 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 M0R296 226 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 SRGAP2BP0DMP2 458 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 SDSP20132 328 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 UBE3AQ05086 875 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 AAMPQ13685 434 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 HIC1Q14526 733 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 PDE12Q6L8Q7 609 aaKnown RBP11.44□□□□□ -0.58
NEDD9-210ENST00000505589 FCHSD1Q86WN1 690 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 EFHBQ8N7U6 833 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 ZNF689Q96CS4 500 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-210ENST00000505589 INPP4AQ96PE3 977 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-210ENST00000505589 GPR20Q99678 358 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 ERAP1Q9NZ08 941 aa11.44□□□□□ -0.58
NEDD9-210ENST00000505589 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-210ENST00000505589 B4E1Z4 1266 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 GRM6O15303 877 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 DGKIO75912 1065 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 HOXA13P31271 388 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-210ENST00000505589 ADAM17P78536 824 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 ZXDAP98168 799 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 SIGLEC14Q08ET2 396 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 COASYQ13057 564 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 SART3Q15020 963 aaKnown RBP11.43□□□□□ -0.58
NEDD9-210ENST00000505589 ZNF589Q86UQ0 364 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-210ENST00000505589 TBC1D10CQ8IV04 446 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 CMTR2Q8IYT2 770 aaKnown RBP11.43□□□□□ -0.58
NEDD9-210ENST00000505589 FBXL6Q8N531 539 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 MICAL1Q8TDZ2 1067 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 SEPT1Q8WYJ6 367 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 CDCA3Q99618 268 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-210ENST00000505589 PHF7Q9BWX1 381 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-210ENST00000505589 RIOX1Q9H6W3 641 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 EHMT1Q9H9B1 1298 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 DIAPH3Q9NSV4 1193 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 PCDHB12Q9Y5F1 795 aa11.43□□□□□ -0.58
NEDD9-210ENST00000505589 NEDD4P46934 1319 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 SORBS3O60504 671 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 CHRNA1P02708 482 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 ATF7P17544 494 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-210ENST00000505589 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-210ENST00000505589 CLUL1Q15846 466 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 UTP14CQ5TAP6 766 aaKnown RBP11.42□□□□□ -0.58
NEDD9-210ENST00000505589 TSHZ1Q6ZSZ6 1077 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 HOMER1Q86YM7 354 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 NPAS4Q8IUM7 802 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 NME8Q8N427 588 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 SMARCC2Q8TAQ2 1214 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 MSLNLQ96KJ4 702 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 SMARCAD1Q9H4L7 1026 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 ALG13Q9NP73 1137 aaKnown RBP11.42□□□□□ -0.58
NEDD9-210ENST00000505589 MAD2L2Q9UI95 211 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 LRFN2Q9ULH4 789 aa11.42□□□□□ -0.58
NEDD9-210ENST00000505589 RALGAPA2Q2PPJ7 1873 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 OPLAHO14841 1288 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 GHRP10912 638 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 SMARCA1P28370 1054 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 DLX2Q07687 328 aaPredicted RBP11.41□□□□□ -0.58
NEDD9-210ENST00000505589 PPFIA1Q13136 1202 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 CBX2Q14781 532 aaPredicted RBP11.41□□□□□ -0.58
NEDD9-210ENST00000505589 FBXO47Q5MNV8 452 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 PCNX4Q63HM2 1172 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 CWC27Q6UX04 472 aaKnown RBP11.41□□□□□ -0.58
NEDD9-210ENST00000505589 STAG2Q8N3U4 1231 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 SMRP1Q8NCR6 262 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 SPPL3Q8TCT6 385 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms