RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 BAG3O95817 575 aa13.06□□□□□ -0.32
UBE3D-206ENST00000505226 SSBP05455 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBE3D-206ENST00000505226 HPDP32754 393 aaPredicted RBP13.06□□□□□ -0.32
UBE3D-206ENST00000505226 BTDP43251 543 aa13.06□□□□□ -0.32
UBE3D-206ENST00000505226 TNNI2P48788 182 aa13.06□□□□□ -0.32
UBE3D-206ENST00000505226 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
UBE3D-206ENST00000505226 NBPF5PQ86XG9 351 aaPredicted RBP13.06□□□□□ -0.32
UBE3D-206ENST00000505226 TMBIM4Q9HC24 238 aa13.06□□□□□ -0.32
UBE3D-206ENST00000505226 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBE3D-206ENST00000505226 SPATA31A1Q5TZJ5 1347 aa13.06□□□□□ -0.32
UBE3D-206ENST00000505226 SLC9A1P19634 815 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 NOVP48745 357 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 ADCY7P51828 1080 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 ORC2Q13416 577 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 SPRED3Q2MJR0 410 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 MAATS1Q7Z4T9 603 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 OTUD6BQ8N6M0 293 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 WHAMMQ8TF30 809 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 SCFD2Q8WU76 684 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 PAGR1Q9BTK6 254 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 YY1AP1Q9H869 796 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 ATXN2Q99700 1313 aaKnown RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 FSBPO95073 299 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 CASP5P51878 434 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 FOXR2Q6PJQ5 311 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 ARHGAP27Q6ZUM4 889 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 LRRC47Q8N1G4 583 aaKnown RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 LRRC57Q8N9N7 239 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 CEP89Q96ST8 783 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 A6NNZ2 444 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 SMARCA1P28370 1054 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 NT5C2P49902 561 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 MARSP56192 900 aaKnown RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 TUBB8Q3ZCM7 444 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 CENPHQ9H3R5 247 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
UBE3D-206ENST00000505226 AJAP1Q9UKB5 411 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-206ENST00000505226 DCDC2CA8MYV0 355 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 BACH1O14867 736 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 ITGA4P13612 1032 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 ZNF844Q08AG5 666 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 KCNH2Q12809 1159 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 C6orf89Q6UWU4 347 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 RBM46Q8TBY0 533 aaKnown RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 NUCKS1Q9H1E3 243 aaKnown RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 PPANQ9NQ55 473 aaKnown RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 PLCB1Q9NQ66 1216 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 E7EVH7 732 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 KIF4AO95239 1232 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 TMOD1P28289 359 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 MNAT1P51948 309 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 IFT88Q13099 833 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 HLTFQ14527 1009 aaKnown RBP eCLIP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 QPCTQ16769 361 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 ARSHQ5FYA8 562 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 C1orf131Q8NDD1 294 aaKnown RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 CEP63Q96MT8 703 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 BCAS3Q9H6U6 928 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 CNOT8Q9UFF9 292 aaKnown RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 DDX25Q9UHL0 483 aaKnown RBP13.04□□□□□ -0.32
UBE3D-206ENST00000505226 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
UBE3D-206ENST00000505226 MYH7BA7E2Y1 1941 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
UBE3D-206ENST00000505226 FAM107AO95990 144 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 USP11P51784 963 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 RHBDL3P58872 404 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 ADAM9Q13443 819 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 RPS6KA1Q15418 735 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 ASIC2Q16515 512 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 METTL13Q8N6R0 699 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 POTECB2RU33 542 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 SART1O43290 800 aaKnown RBP13.03□□□□□ -0.32
UBE3D-206ENST00000505226 CEP104O60308 925 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 HOXD13P35453 343 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 CLK2P49760 499 aaKnown RBP13.03□□□□□ -0.32
UBE3D-206ENST00000505226 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 JMJD4Q9H9V9 463 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 ATAD5Q96QE3 1844 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 CLSTN1O94985 981 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 TNNC1P63316 161 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 HERC4Q5GLZ8 1057 aaPredicted RBP13.03□□□□□ -0.32
UBE3D-206ENST00000505226 ZC3H3Q8IXZ2 948 aaKnown RBP13.03□□□□□ -0.32
UBE3D-206ENST00000505226 RAB34Q9BZG1 259 aa13.03□□□□□ -0.32
UBE3D-206ENST00000505226 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms