RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NEMFO60524 1076 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 CD4P01730 458 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 SLC26A2P50443 739 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 LRRC41Q15345 812 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 E2F4Q16254 413 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 LY6KQ17RY6 165 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 USP28Q96RU2 1077 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 KAT6AQ92794 2004 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 OR52Z1P0C646 297 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 MTFR1Q15390 333 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 PRAMEF19Q5SWL8 479 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 FCHSD1Q86WN1 690 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 SH3TC2Q8TF17 1288 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 FERMT2Q96AC1 680 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 TUFT1Q9NNX1 390 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 WRAP73Q9P2S5 460 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 EML1O00423 815 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 SUPT20HL2P0C7V6 817 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 XRCC6P12956 609 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 JAK3P52333 1124 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 ANKRD33Q7Z3H0 272 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 PLA2G4DQ86XP0 818 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 EVPLQ92817 2033 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 PPFIA4O75335 1185 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 UBXN2AP68543 259 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 GUCY1B3Q02153 619 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 TRIM71Q2Q1W2 868 aaKnown RBP9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 TLK2Q86UE8 772 aa9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 JPH1Q9HDC5 661 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-208ENST00000505065 CCNT1O60563 726 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 HIC1Q14526 733 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 EPHA7Q15375 998 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 HSDL1Q3SXM5 330 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 COL13A1Q5TAT6 717 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 TRAF7Q6Q0C0 670 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 CHMP5Q9NZZ3 219 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 SLC9A2Q9UBY0 812 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 DBR1Q9UK59 544 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 NOL7Q9UMY1 257 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 A0A1W2PQ27 194 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 A0A1W2PQ64 194 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 A0A1W2PQD8 194 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 SLC9C1Q4G0N8 1177 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 MARCH8Q5T0T0 291 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 RESP18Q5W5W9 173 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 C4orf19Q8IY42 314 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 CNPY2Q9Y2B0 182 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 CABYRO75952 493 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 CPT1AP50416 773 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 PTGDRQ13258 359 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 NBR1Q14596 966 aa9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 FNDC1Q4ZHG4 1894 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE2-208ENST00000505065 SLITRK3O94933 977 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 TXNP10599 105 aaKnown RBP9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 RPA1P27694 616 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 ANP32AP39687 249 aaKnown RBP9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 ACTR2P61160 394 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 FAM26DQ5JW98 314 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 NFRKBQ6P4R8 1299 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 PNMA5Q96PV4 448 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 ZNF577Q9BSK1 485 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 CALCRLQ16602 461 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 COPS5Q92905 334 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 ZNF862O60290 1169 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 SF3A1Q15459 793 aaKnown RBP9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 TMEM174Q8WUU8 243 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 VWCEQ96DN2 955 aa9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE2-208ENST00000505065 PTGS1P23219 599 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 LETM2Q2VYF4 491 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 PRR16Q569H4 304 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 NAALADL2Q58DX5 795 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 ENGASEQ8NFI3 743 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 LEO1Q8WVC0 666 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 TOX2Q96NM4 488 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 TEKT3Q9BXF9 490 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 CEP131Q9UPN4 1083 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 FRMD3A2A2Y4 597 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 GGPS1O95749 300 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 LGALS2P05162 132 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 GRIN1Q05586 938 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 FSCN1Q16658 493 aaKnown RBP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 UGCGQ16739 394 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 CCDC60Q8IWA6 550 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 DNAH12Q6ZR08 3092 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 NLRC5Q86WI3 1866 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 WDR64B1ANS9 1081 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 H3BQV1 296 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 SHC4Q6S5L8 630 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 U2AF1L4Q8WU68 220 aaKnown RBP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 SEPT1Q8WYJ6 367 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 A0A1W2PQ45 241 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 A0A1W2PQY0 241 aa9.35□□□□□ -0.91
CDC42SE2-208ENST00000505065 CUTAO60888 179 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms