RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 NLRX1Q86UT6 975 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 MXRA8Q9BRK3 442 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 BCAS3Q9H6U6 928 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 JADE2Q9NQC1 790 aa19.19■□□□□ 0.66
SYNE4-207ENST00000505054 FAM86B1E9PN63 330 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 GGPS1O95749 300 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 MMP1P03956 469 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 PFKMP08237 780 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 FAM86B2P0C5J1 330 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 MRPS5P82675 430 aaKnown RBP19.18■□□□□ 0.66
SYNE4-207ENST00000505054 CEP55Q53EZ4 464 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 EMID1Q96A84 441 aaPredicted RBP19.18■□□□□ 0.66
SYNE4-207ENST00000505054 POLR3EQ9NVU0 708 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 PCDHA11Q9Y5I1 949 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 SLC4A7Q9Y6M7 1214 aa19.18■□□□□ 0.66
SYNE4-207ENST00000505054 NCOR1O75376 2440 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 A6NJR5 290 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 MEIS1O00470 390 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 SORBS3O60504 671 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 SUPT20HL2P0C7V6 817 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 KRT2P35908 639 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 CPT1AP50416 773 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 GUCY1B3Q02153 619 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 NR5A1Q13285 461 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 MTMR1Q13613 665 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 TRIM29Q14134 588 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 CCDC85BQ15834 202 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-207ENST00000505054 CELF3Q5SZQ8 465 aaKnown RBP19.17■□□□□ 0.66
SYNE4-207ENST00000505054 PPP2R2DQ66LE6 453 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 KRT25Q7Z3Z0 450 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 FAM184AQ8NB25 1140 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 ADAMTS19Q8TE59 1207 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 TBCKQ8TEA7 893 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 AFG1LQ8WV93 481 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 TNFRSF25Q93038 417 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 SNX21Q969T3 373 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 SCLYQ96I15 445 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 C8orf76Q96K31 380 aa19.17■□□□□ 0.66
SYNE4-207ENST00000505054 IGLV3-22A0A075B6J6 115 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 ZBBXA8MT70 800 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 ATP9AO75110 1047 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 ARP10275 920 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 KCNA2P16389 499 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 CIITAP33076 1130 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 PURAQ00577 322 aaKnown RBP19.16■□□□□ 0.66
SYNE4-207ENST00000505054 LAMC2Q13753 1193 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 NONOQ15233 471 aaKnown RBP eCLIP19.16■□□□□ 0.66
SYNE4-207ENST00000505054 EARS2Q5JPH6 523 aaKnown RBP19.16■□□□□ 0.66
SYNE4-207ENST00000505054 MYSM1Q5VVJ2 828 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 NIPA1Q7RTP0 329 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 DHX37Q8IY37 1157 aaKnown RBP19.16■□□□□ 0.66
SYNE4-207ENST00000505054 DIS3L2Q8IYB7 885 aaKnown RBP19.16■□□□□ 0.66
SYNE4-207ENST00000505054 CDHR1Q96JP9 859 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 SENP7Q9BQF6 1050 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 KCNH7Q9NS40 1196 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 REV3LO60673 3130 aa19.16■□□□□ 0.66
SYNE4-207ENST00000505054 CCDC194A0A1B0GVG4 234 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 FAM205CA6NFA0 338 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 BTBD18B2RXH4 712 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 K7ELQ4 463 aaPredicted RBP19.15■□□□□ 0.66
SYNE4-207ENST00000505054 MMP3P08254 477 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 ATP2A2P16615 1042 aaKnown RBP19.15■□□□□ 0.66
SYNE4-207ENST00000505054 GJB2P29033 226 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 ZNF76P36508 570 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 RABGGTBP53611 331 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 NEDD9Q14511 834 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 INF2Q27J81 1249 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 FBXO18Q8NFZ0 1043 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 LENG9Q96B70 501 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 VWCEQ96DN2 955 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 UHRF1Q96T88 793 aaPredicted RBP19.15■□□□□ 0.66
SYNE4-207ENST00000505054 TSPYL2Q9H2G4 693 aaPredicted RBP19.15■□□□□ 0.66
SYNE4-207ENST00000505054 BRMS1Q9HCU9 246 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 TRMT13Q9NUP7 481 aaKnown RBP19.15■□□□□ 0.66
SYNE4-207ENST00000505054 PKD2L1Q9P0L9 805 aa19.15■□□□□ 0.66
SYNE4-207ENST00000505054 TRANK1O15050 2925 aa19.14■□□□□ 0.66
SYNE4-207ENST00000505054 MYH7BA7E2Y1 1941 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 MAFGO15525 162 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 COL9A1P20849 921 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 USP11P51784 963 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 HSDL1Q3SXM5 330 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 METTL7BQ6UX53 244 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 PIK3AP1Q6ZUJ8 805 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 CYFIP1Q7L576 1253 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 PLA2G4DQ86XP0 818 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 PPTC7Q8NI37 304 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 SPATA33Q96N06 139 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 AGO4Q9HCK5 861 aaKnown RBP19.14■□□□□ 0.65
SYNE4-207ENST00000505054 SMC3Q9UQE7 1217 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 TELO2Q9Y4R8 837 aa19.14■□□□□ 0.65
SYNE4-207ENST00000505054 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.65
SYNE4-207ENST00000505054 MYL3P08590 195 aa19.13■□□□□ 0.65
SYNE4-207ENST00000505054 CYP2C9P11712 490 aa19.13■□□□□ 0.65
SYNE4-207ENST00000505054 HOXD8P13378 290 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-207ENST00000505054 ITGB3BPQ13352 177 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-207ENST00000505054 BRDTQ58F21 947 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-207ENST00000505054 MTG1Q9BT17 334 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-207ENST00000505054 MLXIPQ9HAP2 919 aa19.13■□□□□ 0.65
SYNE4-207ENST00000505054 COL4A4P53420 1690 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-207ENST00000505054 TCF20Q9UGU0 1960 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms